Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12e17
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   3.8  
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    24   3.8  
DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted ...    23   6.6  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 420 FPETDGFSFQDIVFITTYSRSW 485
           FPE+ GF +QD +   ++   W
Sbjct: 508 FPESSGFLYQDCLNRASFPAQW 529


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +2

Query: 77  CPPVCSPPDCRPICGPAS 130
           C   CSP  C P C P S
Sbjct: 150 CLSKCSPTKCVPFCRPFS 167


>DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
 Frame = +2

Query: 77  CPPV--CSPPDCRPICGPASPLLCQSSV-PPTQRCY 175
           C P   C P +    CGP   L C  +V     RCY
Sbjct: 49  CVPTKECPPDEVFKCCGPCYQLNCYGTVLDCAGRCY 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,523
Number of Sequences: 2352
Number of extensions: 12740
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)