Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12e14
         (313 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   2.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   3.0  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    20   5.3  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    20   6.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    20   6.9  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 96  PNNIHCHEFRRV 61
           PN ++C++ RRV
Sbjct: 211 PNKLNCYDLRRV 222


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 136 ISANVEASRGCRPTLARCRLCDG 204
           IS+ V  +    PTL  CRL  G
Sbjct: 44  ISSTVSRNTDTYPTLETCRLVCG 66


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 190 DNEPELADSPATLRRSP 140
           DN P  A +PA   R P
Sbjct: 1   DNLPSSASNPAVSERDP 17


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -2

Query: 141 RYRFSTEYLV*FILXPNNIHCHEFRRVNNTLRKN 40
           RY+   EYL   +   N      +  V+N  RK+
Sbjct: 208 RYQLLNEYLETLVQETNRTSVEGWTDVSNVKRKS 241


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -2

Query: 141 RYRFSTEYLV*FILXPNNIHCHEFRRVNNTLRKN 40
           RY+   EYL   +   N      +  V+N  RK+
Sbjct: 208 RYQLLNEYLETLVQETNRTSVEGWTDVSNVKRKS 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,172
Number of Sequences: 336
Number of extensions: 866
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)