Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12e13
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    31   0.007
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.8  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.1  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 31.1 bits (67), Expect = 0.007
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
 Frame = -1

Query: 534 SHMFHSIFFIYCMTDMG------TSSPSCFFSITFYWCTKSIFYSRILFA 403
           ++M ++I F  C+T  G       +S  C  ++TF W +K +FYS+I+ +
Sbjct: 192 TYMPYNIVFGLCLTTFGLLPVNGVTSEKC--NLTFSWYSKKVFYSKIIIS 239


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/45 (24%), Positives = 24/45 (53%)
 Frame = +1

Query: 130 ILQTKFRTNTRYFSSEKESGLTKSKSKESASHVSTDVRPLGEKIK 264
           IL   F++  +  + + E+   +SKS E   +++   R LG+ ++
Sbjct: 191 ILIRSFKSRYKDLNQKLETACEQSKSVEELMNIANYYRILGDTVE 235



 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = -1

Query: 504 YCMTDMGTSSPSCFFSITFYWCTKSIFYSRILFALL 397
           Y +   GT   + FF      C   ++Y  +L +L+
Sbjct: 154 YGIQVFGTMQRTSFFKTFLNSCLMDVYYEFLLISLI 189


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 264 RNYKNCFLHRRNTSRCR 314
           R  KNC + +R  +RC+
Sbjct: 123 REEKNCIIDKRQRNRCQ 139


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 355 FSSNSPNSIYSEALEKCKQDPRVEDA 432
           F S+SP+S  S+ L+   Q P+ + A
Sbjct: 63  FHSSSPSSDTSQDLQHSYQSPQTQPA 88


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 424 EDALGAPIKGYGEE 465
           E  +GAPIKG G E
Sbjct: 431 ETQVGAPIKGPGRE 444


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.131    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,529
Number of Sequences: 336
Number of extensions: 1873
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)