Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12e12
         (604 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.0  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   2.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   2.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   2.6  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   2.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   6.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.0  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 556 ADLTNSIIQRQMIPPMTNVTTK 491
           AD  +++I    +PP T+ TT+
Sbjct: 149 ADAASNVISSTPLPPTTSTTTR 170


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 63  NYKSNVLKHNYTVGSF 110
           NY SNVL + Y  G++
Sbjct: 69  NYNSNVLSNGYGYGNY 84


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 63  NYKSNVLKHNYTVGSF 110
           NY SNVL + Y  G++
Sbjct: 69  NYNSNVLSNGYGYGNY 84


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 63  NYKSNVLKHNYTVGSF 110
           NY SNVL + Y  G++
Sbjct: 69  NYNSNVLSNGYGYGNY 84


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 63  NYKSNVLKHNYTVGSF 110
           NY SNVL + Y  G++
Sbjct: 69  NYNSNVLSNGYGYGNY 84


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 92  VVFEHIAFIIPISCVYFFFVN 30
           VVF+ + FI+  +C+   + N
Sbjct: 162 VVFDLVYFILAFACISIAYTN 182


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = +3

Query: 357 DFTV-ERHSPLLYNLFESTAYL 419
           D T+ E H  + YN+ +S  YL
Sbjct: 310 DLTLQENHGKISYNVLQSMKYL 331


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
          protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 74 AFIIPISCVYFF 39
          AF+ P+ C+ FF
Sbjct: 57 AFVAPVKCLAFF 68


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 74  AFIIPISCVYFF 39
           AF+ P+ C+ FF
Sbjct: 290 AFVAPVKCLAFF 301


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 74  AFIIPISCVYFF 39
           AF+ P+ C+ FF
Sbjct: 290 AFVAPVKCLAFF 301


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -3

Query: 128 FREHICETPDSIVVFEHIAFIIPISCVY 45
           FRE++ E       F +  F+  I C++
Sbjct: 142 FREYLAEAVQLYFQFYYTYFLCVIVCIF 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,151
Number of Sequences: 336
Number of extensions: 2853
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)