Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12e08
(562 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011560-1|AAS15696.1| 396|Drosophila melanogaster AT19681p pro... 157 1e-38
AE013599-190|AAF57368.2| 396|Drosophila melanogaster CG3189-PA ... 157 1e-38
BT025065-1|ABE73236.1| 746|Drosophila melanogaster IP15551p pro... 33 0.35
AF129814-1|AAD18071.1| 752|Drosophila melanogaster carbamyl pho... 33 0.35
AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-P... 33 0.35
X04813-1|CAA28502.1| 2236|Drosophila melanogaster protein ( Dros... 32 0.61
X03877-1|CAA27511.1| 46|Drosophila melanogaster rudimentary pr... 31 0.81
BT003804-1|AAO41487.1| 226|Drosophila melanogaster AT13886p pro... 31 1.1
AY058252-1|AAL13481.1| 561|Drosophila melanogaster GH01404p pro... 31 1.1
AF134239-1|AAD43051.1| 1057|Drosophila melanogaster Recq helicas... 31 1.1
AE014296-2400|AAN11801.1| 1058|Drosophila melanogaster CG4879-PB... 31 1.1
AE013599-625|AAM68859.1| 226|Drosophila melanogaster CG30376-PA... 31 1.1
AB031087-1|BAA88313.1| 1058|Drosophila melanogaster DNA helicase... 31 1.1
AB031086-1|BAA88312.1| 1058|Drosophila melanogaster DNA helicase... 31 1.1
AE014298-2132|AAF48444.1| 434|Drosophila melanogaster CG9123-PA... 29 3.3
BT024944-1|ABE01174.1| 244|Drosophila melanogaster IP16026p pro... 28 7.5
AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD... 28 7.5
AY058616-1|AAL13845.1| 508|Drosophila melanogaster LD30988p pro... 28 9.9
AF229928-1|AAF33404.1| 554|Drosophila melanogaster cytoplasmic ... 28 9.9
AF227210-1|AAF43016.1| 604|Drosophila melanogaster AAA family p... 28 9.9
AF227209-1|AAF43014.1| 604|Drosophila melanogaster AAA family p... 28 9.9
AE014297-2170|AAF55289.2| 604|Drosophila melanogaster CG6815-PA... 28 9.9
>BT011560-1|AAS15696.1| 396|Drosophila melanogaster AT19681p
protein.
Length = 396
Score = 157 bits (381), Expect = 1e-38
Identities = 70/104 (67%), Positives = 82/104 (78%), Gaps = 1/104 (0%)
Frame = +2
Query: 254 TEEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENG-ELSP 430
T+EERLEL +LD ELD FID LEK+RY EGWPEDRW+EEMDKHPFFMK P+ G ++ P
Sbjct: 11 TDEERLELAAQLDAELDAFIDGLEKKRYEEGWPEDRWQEEMDKHPFFMKRAPQPGDDVHP 70
Query: 431 LAEGLANLKFDPEENTPVELASNYKEDGNFXFKHKNYRLAILGY 562
+ EGL LK+DPEENT ELA NYKEDGNF KHK +R+AI +
Sbjct: 71 MFEGLQKLKYDPEENTRDELALNYKEDGNFYMKHKKFRMAIYSF 114
>AE013599-190|AAF57368.2| 396|Drosophila melanogaster CG3189-PA
protein.
Length = 396
Score = 157 bits (381), Expect = 1e-38
Identities = 70/104 (67%), Positives = 82/104 (78%), Gaps = 1/104 (0%)
Frame = +2
Query: 254 TEEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENG-ELSP 430
T+EERLEL +LD ELD FID LEK+RY EGWPEDRW+EEMDKHPFFMK P+ G ++ P
Sbjct: 11 TDEERLELAAQLDAELDAFIDGLEKKRYEEGWPEDRWQEEMDKHPFFMKRAPQPGDDVHP 70
Query: 431 LAEGLANLKFDPEENTPVELASNYKEDGNFXFKHKNYRLAILGY 562
+ EGL LK+DPEENT ELA NYKEDGNF KHK +R+AI +
Sbjct: 71 MFEGLQKLKYDPEENTRDELALNYKEDGNFYMKHKKFRMAIYSF 114
>BT025065-1|ABE73236.1| 746|Drosophila melanogaster IP15551p
protein.
Length = 746
Score = 32.7 bits (71), Expect = 0.35
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 392 FMKSTPE--NGELSPLAEGLANLKFDPEENTPVELASNYKEDGNFXFKHKNYRLAI 553
F K+TP+ NGEL LAE LAN +FD N P+ + ++ RLA+
Sbjct: 146 FDKTTPDDINGELRHLAEFLANKQFDLVINLPMSGGGARRVSSFMTHGYRTRRLAV 201
>AF129814-1|AAD18071.1| 752|Drosophila melanogaster carbamyl
phosphate synthetase II protein.
Length = 752
Score = 32.7 bits (71), Expect = 0.35
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 392 FMKSTPE--NGELSPLAEGLANLKFDPEENTPVELASNYKEDGNFXFKHKNYRLAI 553
F K+TP+ NGEL LAE LAN +FD N P+ + ++ RLA+
Sbjct: 483 FDKTTPDDINGELRHLAEFLANKQFDLVINLPMSGGGARRVSSFMTHGYRTRRLAV 538
>AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-PA,
isoform A protein.
Length = 2224
Score = 32.7 bits (71), Expect = 0.35
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 392 FMKSTPE--NGELSPLAEGLANLKFDPEENTPVELASNYKEDGNFXFKHKNYRLAI 553
F K+TP+ NGEL LAE LAN +FD N P+ + ++ RLA+
Sbjct: 1380 FDKTTPDDINGELRHLAEFLANKQFDLVINLPMSGGGARRVSSFMTHGYRTRRLAV 1435
>X04813-1|CAA28502.1| 2236|Drosophila melanogaster protein (
Drosophila melanogasterrudimentary gene. ).
Length = 2236
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 392 FMKSTPE--NGELSPLAEGLANLKFDPEENTPVELASNYKEDGNFXFKHKNYRLAI 553
F K+TP+ NGEL LAE LAN +FD N P+ + ++ RLA+
Sbjct: 1383 FDKTTPDDINGELRHLAEFLANKQFDLVINLPMSGGVPRRVSSFMTHGYRTRRLAV 1438
>X03877-1|CAA27511.1| 46|Drosophila melanogaster rudimentary
protein fragment protein.
Length = 46
Score = 31.5 bits (68), Expect = 0.81
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 392 FMKSTPE--NGELSPLAEGLANLKFDPEENTPV 484
F K+TP+ NGEL LAE LAN +FD N P+
Sbjct: 8 FDKTTPDDINGELRHLAEFLANKQFDLVINLPM 40
>BT003804-1|AAO41487.1| 226|Drosophila melanogaster AT13886p
protein.
Length = 226
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 224 ANKSDVKSPMTEEERLELCQKLDKELDDFIDSLEKRRYTE---GWPEDRWEEEMDK 382
A S + EE+RL+ + E D+ LE R E G PED EEEMD+
Sbjct: 112 AQVSQYQQRQEEEQRLDGDPEAKAEEHDYESDLEVRSVRETVFGPPEDNSEEEMDR 167
>AY058252-1|AAL13481.1| 561|Drosophila melanogaster GH01404p
protein.
Length = 561
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +2
Query: 257 EEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLA 436
E + EL ++ + L + +L+ R+ G+ ++ ++ FF K E SP+
Sbjct: 162 ERKLKELEEQRPQSLKEVPKALKDRK---GFKQEN-SKQTSISSFFKKEIKEEPIDSPIQ 217
Query: 437 EGLANLK---FDPEENTPVELASNYKED 511
E N+K D EE+TP ++ASN+ ++
Sbjct: 218 EERVNIKSEQMDLEESTPKDIASNHVKE 245
>AF134239-1|AAD43051.1| 1057|Drosophila melanogaster Recq helicase 5
protein.
Length = 1057
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +2
Query: 257 EEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLA 436
E + EL ++ + L + +L+ R+ G+ ++ ++ FF K E SP+
Sbjct: 659 ERKLKELEEQRPQSLKEVPKALKDRK---GFKQEN-SKQTSISSFFKKEIKEEPIDSPIQ 714
Query: 437 EGLANLK---FDPEENTPVELASNYKED 511
E N+K D EE+TP ++ASN+ ++
Sbjct: 715 EERVNIKSEQMDLEESTPKDIASNHVKE 742
>AE014296-2400|AAN11801.1| 1058|Drosophila melanogaster CG4879-PB,
isoform B protein.
Length = 1058
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +2
Query: 257 EEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLA 436
E + EL ++ + L + +L+ R+ G+ ++ ++ FF K E SP+
Sbjct: 659 ERKLKELEEQRPQSLKEVPKALKDRK---GFKQEN-SKQTSISSFFKKEIKEEPIDSPIQ 714
Query: 437 EGLANLK---FDPEENTPVELASNYKED 511
E N+K D EE+TP ++ASN+ ++
Sbjct: 715 EERVNIKSEQMDLEESTPKDIASNHVKE 742
>AE013599-625|AAM68859.1| 226|Drosophila melanogaster CG30376-PA
protein.
Length = 226
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 224 ANKSDVKSPMTEEERLELCQKLDKELDDFIDSLEKRRYTE---GWPEDRWEEEMDK 382
A S + EE+RL+ + E D+ LE R E G PED EEEMD+
Sbjct: 112 AQVSQYQQRQEEEQRLDGDPEAKAEEHDYESDLEVRSVRETVFGPPEDNSEEEMDR 167
>AB031087-1|BAA88313.1| 1058|Drosophila melanogaster DNA helicase
RECQE protein.
Length = 1058
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +2
Query: 257 EEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLA 436
E + EL ++ + L + +L+ R+ G+ ++ ++ FF K E SP+
Sbjct: 659 ERKLKELEEQRPQSLKEVPKALKDRK---GFKQEN-SKQTSISSFFKKEIKEEPIDSPIQ 714
Query: 437 EGLANLK---FDPEENTPVELASNYKED 511
E N+K D EE+TP ++ASN+ ++
Sbjct: 715 EERVNIKSEQMDLEESTPKDIASNHVKE 742
>AB031086-1|BAA88312.1| 1058|Drosophila melanogaster DNA helicase
RECQE protein.
Length = 1058
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +2
Query: 257 EEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLA 436
E + EL ++ + L + +L+ R+ G+ ++ ++ FF K E SP+
Sbjct: 659 ERKLKELEEQRPQSLKEVPKALKDRK---GFKQEN-SKQTSISSFFKKEIKEEPIDSPIQ 714
Query: 437 EGLANLK---FDPEENTPVELASNYKED 511
E N+K D EE+TP ++ASN+ ++
Sbjct: 715 EERVNIKSEQMDLEESTPKDIASNHVKE 742
>AE014298-2132|AAF48444.1| 434|Drosophila melanogaster CG9123-PA
protein.
Length = 434
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 179 FVKLLYLKSN*IMAEANKSDVKSPMTEEERLELCQKLDKELDDFIDS 319
FV + Y + + AE K K+ EE E DKE DDF DS
Sbjct: 352 FVTIEYEQDKKLDAEKKKEKKKNKKDEESSEESNSSEDKENDDFSDS 398
>BT024944-1|ABE01174.1| 244|Drosophila melanogaster IP16026p
protein.
Length = 244
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/81 (19%), Positives = 38/81 (46%)
Frame = +2
Query: 230 KSDVKSPMTEEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTP 409
++D +SP + + + QK+ +DD + + R+ + P+ E E+ + F + +
Sbjct: 84 QNDPRSPPIQSKSFRILQKITDTVDDGSGNGDSRQDLQQTPQ---EAELQRPQFARQMSA 140
Query: 410 ENGELSPLAEGLANLKFDPEE 472
+ SP E + L+ ++
Sbjct: 141 QQARNSPTIEQMRRLQIGQDQ 161
>AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD,
isoform D protein.
Length = 918
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/81 (19%), Positives = 38/81 (46%)
Frame = +2
Query: 230 KSDVKSPMTEEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTP 409
++D +SP + + + QK+ +DD + + R+ + P+ E E+ + F + +
Sbjct: 758 QNDPRSPPIQSKSFRILQKITDTVDDGSGNGDSRQDLQQTPQ---EAELQRPQFARQMSA 814
Query: 410 ENGELSPLAEGLANLKFDPEE 472
+ SP E + L+ ++
Sbjct: 815 QQARNSPTIEQMRRLQIGQDQ 835
>AY058616-1|AAL13845.1| 508|Drosophila melanogaster LD30988p
protein.
Length = 508
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 483 TGVFSSGSNLRFARPSASGESSPFSGVDFIKN 388
TGV S R +P+ GE+S F+ +D +KN
Sbjct: 274 TGVVSRYVEARIGKPTLVGETSRFAFLDALKN 305
>AF229928-1|AAF33404.1| 554|Drosophila melanogaster cytoplasmic
protein 89BC protein.
Length = 554
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 483 TGVFSSGSNLRFARPSASGESSPFSGVDFIKN 388
TGV S R +P+ GE+S F+ +D +KN
Sbjct: 224 TGVVSRYVEARIGKPTLVGETSRFAFLDALKN 255
>AF227210-1|AAF43016.1| 604|Drosophila melanogaster AAA family
protein Bor protein.
Length = 604
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 483 TGVFSSGSNLRFARPSASGESSPFSGVDFIKN 388
TGV S R +P+ GE+S F+ +D +KN
Sbjct: 274 TGVVSRYVEARIGKPTLVGETSRFAFLDALKN 305
>AF227209-1|AAF43014.1| 604|Drosophila melanogaster AAA family
protein Bor protein.
Length = 604
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 483 TGVFSSGSNLRFARPSASGESSPFSGVDFIKN 388
TGV S R +P+ GE+S F+ +D +KN
Sbjct: 274 TGVVSRYVEARIGKPTLVGETSRFAFLDALKN 305
>AE014297-2170|AAF55289.2| 604|Drosophila melanogaster CG6815-PA
protein.
Length = 604
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 483 TGVFSSGSNLRFARPSASGESSPFSGVDFIKN 388
TGV S R +P+ GE+S F+ +D +KN
Sbjct: 274 TGVVSRYVEARIGKPTLVGETSRFAFLDALKN 305
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,538,969
Number of Sequences: 53049
Number of extensions: 400813
Number of successful extensions: 1403
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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