Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12e08
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical pr... 77 9e-15
Z68114-1|CAA92152.1| 451|Caenorhabditis elegans Hypothetical pr... 34 0.080
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z49911-9|CAA90133.1| 682|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z71266-5|CAD56593.1| 370|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical ... 29 1.7
U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily as... 29 2.3
U80032-2|AAM15555.1| 643|Caenorhabditis elegans Osmotic stress ... 29 3.0
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 29 3.0
AY360470-1|AAR12229.1| 643|Caenorhabditis elegans osmotic stres... 29 3.0
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 29 3.0
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 29 3.0
Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical pr... 27 9.2
AL117204-43|CAB55131.2| 917|Caenorhabditis elegans Hypothetical... 27 9.2
>U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical
protein C17G10.2 protein.
Length = 419
Score = 77.0 bits (181), Expect = 9e-15
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Frame = +2
Query: 242 KSPMTEEERLELCQKLDKELDDFIDSL-----EKRRYTEGWPEDRWEEEMDKHPFFMKST 406
K TE ER L +KLD +LD F++ + +K+ + + D W +E+D+HP FM
Sbjct: 6 KKKFTESERAALAKKLDDDLDQFMEEMAARKSDKKEERKPFDFDDWCKEIDQHPAFMTEM 65
Query: 407 PENGELSPLAEGLANLKFDPEENTPVEL-ASNYKEDGNFXFKHKNYRLA 550
P +G+ E L ++K+D E++ ++ A ++KE+GN FK K YR A
Sbjct: 66 PTDGKYQDTIEALQSMKYDKEDDEDKQMNAEHHKEEGNKHFKFKKYRWA 114
>Z68114-1|CAA92152.1| 451|Caenorhabditis elegans Hypothetical
protein F17A2.1 protein.
Length = 451
Score = 33.9 bits (74), Expect = 0.080
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 245 SPMTEEERLELCQKLDKELDDFIDSLEKRRYTEGWP-EDRWEEEMDK 382
S +EEE ++ + D+E+ +DSLEK++ T+G P E ++MDK
Sbjct: 194 SETSEEEDVDSDGECDEEVQAVLDSLEKKKITDGNPIEVEQHKKMDK 240
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 32.3 bits (70), Expect = 0.25
Identities = 19/79 (24%), Positives = 37/79 (46%)
Frame = +2
Query: 257 EEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLA 436
+ E+LEL + + K D + +++ +GW ++ W E+ K K T EL+
Sbjct: 1400 QAEKLELEKIIQKLEVDIAEKEQEKTDNDGWNDEDWREDDQKETESEKLTQLRNELTARI 1459
Query: 437 EGLANLKFDPEENTPVELA 493
E L + K + + +L+
Sbjct: 1460 EQLESQKSNEQAQMSEKLS 1478
>Z49911-9|CAA90133.1| 682|Caenorhabditis elegans Hypothetical
protein M28.7 protein.
Length = 682
Score = 31.1 bits (67), Expect = 0.57
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 278 CQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKS-TPENGELS 427
CQ+L ++LDD + +EK + E + ++ E++DK + + +PE +LS
Sbjct: 50 CQELHRQLDDHRNRIEKAKTDETYKKENALEQLDKLKQRLTALSPEKEQLS 100
>Z71266-5|CAD56593.1| 370|Caenorhabditis elegans Hypothetical
protein R06C7.5b protein.
Length = 370
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 287 LDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLAEGLANL 454
L + D ID ++ R WP R EE KH M G+L P A G+ +L
Sbjct: 50 LKQVTQDAIDEMKSNRDVFDWPFIRSEERKLKHD-VMAHNHAFGKLCPTAAGIIHL 104
>Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical
protein R06C7.5a protein.
Length = 478
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 287 LDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLAEGLANL 454
L + D ID ++ R WP R EE KH M G+L P A G+ +L
Sbjct: 50 LKQVTQDAIDEMKSNRDVFDWPFIRSEERKLKHD-VMAHNHAFGKLCPTAAGIIHL 104
>AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical
protein Y57G7A.6 protein.
Length = 883
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 215 MAEANKSDVKSPMTEEERLELCQKLDKELDDFIDSL 322
MAEA K+D S ++E ++L++ Q L K D + +L
Sbjct: 539 MAEAYKNDSSSEISELKKLKVLQDLSKPFGDAVGAL 574
>U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily
assigned gene nameprotein 151 protein.
Length = 785
Score = 29.1 bits (62), Expect = 2.3
Identities = 28/113 (24%), Positives = 48/113 (42%)
Frame = +2
Query: 221 EANKSDVKSPMTEEERLELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMK 400
E D+KS E E+ D +D+ I+ E +Y + +W +E+D P M
Sbjct: 406 EEPMDDLKSEAGETTASEMM--FDDGIDEDINMAEVEKYRKERENAQWPDEVDT-PMDMP 462
Query: 401 STPENGELSPLAEGLANLKFDPEENTPVELASNYKEDGNFXFKHKNYRLAILG 559
+ + L + +DP+EN P++ A + + N+ KN I G
Sbjct: 463 ARIAFQKYRGL-KSFRTSTWDPKENLPLDYARIF-QFANYRNTKKNVMSKIGG 513
>U80032-2|AAM15555.1| 643|Caenorhabditis elegans Osmotic stress
resistant protein 1 protein.
Length = 643
Score = 28.7 bits (61), Expect = 3.0
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +2
Query: 281 QKLDKELDDFIDS-LEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLAEGLANLK 457
Q+ D++ DD D + +RR ++G P+ E + +KS+P EL AE + L
Sbjct: 247 QEEDEDDDDLEDEDVPRRRSSDGEPQSEAEHQRRDLARRLKSSPRLKELLQNAEVQSLLS 306
Query: 458 FDPEENTPVE----LASNYKEDGNF 520
+ ++P+ LA N +++ F
Sbjct: 307 YQRMRDSPLSKRRPLAMNDEDESAF 331
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 448 CETLCQWRKLTIFRS*LHKKWMFV 377
CET W ++F+ +HK+W FV
Sbjct: 120 CETNRLWHTNSMFKKPMHKRWTFV 143
>AY360470-1|AAR12229.1| 643|Caenorhabditis elegans osmotic stress
resistance protein protein.
Length = 643
Score = 28.7 bits (61), Expect = 3.0
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +2
Query: 281 QKLDKELDDFIDS-LEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLAEGLANLK 457
Q+ D++ DD D + +RR ++G P+ E + +KS+P EL AE + L
Sbjct: 247 QEEDEDDDDLEDEDVPRRRSSDGEPQSEAEHQRRDLARRLKSSPRLKELLQNAEVQSLLS 306
Query: 458 FDPEENTPVE----LASNYKEDGNF 520
+ ++P+ LA N +++ F
Sbjct: 307 YQRMRDSPLSKRRPLAMNDEDESAF 331
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 448 CETLCQWRKLTIFRS*LHKKWMFV 377
CET W ++F+ +HK+W FV
Sbjct: 291 CETNRLWHTNSMFKKPMHKRWTFV 314
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 448 CETLCQWRKLTIFRS*LHKKWMFV 377
CET W ++F+ +HK+W FV
Sbjct: 30 CETNRLWHTNSMFKKPMHKRWTFV 53
>Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical
protein ZK945.3 protein.
Length = 766
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 227 NKSDVKSPMTEEERLELCQKLDKELDDFIDSLEKRRYTEGWPED 358
NK D K + EE+ L K+DK + D ++ L+K T + D
Sbjct: 31 NKVDRKRIVKIEEKAALKSKVDKAVKDELERLKKSSSTSVFDND 74
>AL117204-43|CAB55131.2| 917|Caenorhabditis elegans Hypothetical
protein Y116A8C.26a protein.
Length = 917
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +2
Query: 272 ELCQKLDKELDDFIDSLEKRRYTEGWPEDRWEEEMDKHPFFMKSTPENGELSPLAEGLAN 451
E +K K L+ ++ + + +PE MD+H F S + +PL + +
Sbjct: 621 EFLEKRTKALNMYLSCILQPHLLRNYPE------MDRHVFDFLSQKKYANSNPLTKKFMS 674
Query: 452 LKFDPEEN 475
FDP N
Sbjct: 675 AMFDPIRN 682
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,996,848
Number of Sequences: 27780
Number of extensions: 223278
Number of successful extensions: 801
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -