Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12e08
         (562 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    26   0.30 
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           25   0.52 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    25   0.69 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           25   0.69 

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 105 FFVENYFIKRTCSLMFHKHNP 43
           F V + FIKR CS +F K  P
Sbjct: 92  FVVPHQFIKRICSALFGKIKP 112


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 452 LKFDPEENTPVELASNYKEDGNFXFKHKNYRLAILGY 562
           L F     TP  + + Y  D +  F   NYRL ILG+
Sbjct: 2   LAFQLGSGTP--MGAKYLMDSDVIFVTINYRLGILGF 36


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 482 VELASNYKEDGNFXFKHKNYRLAILGY 562
           + + + Y  D +  F   NYRL ILG+
Sbjct: 139 IPMGAKYLMDSDVIFVTINYRLGILGF 165


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 482 VELASNYKEDGNFXFKHKNYRLAILGY 562
           + + + Y  D +  F   NYRL ILG+
Sbjct: 139 IPMGAKYLMDSDVIFVTINYRLGILGF 165


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,648
Number of Sequences: 438
Number of extensions: 2859
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)