Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12e07
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical pr... 177 3e-45
U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical pr... 150 6e-37
AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondria... 61 6e-10
Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 49 3e-06
U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical p... 46 3e-05
U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U55372-1|AAA98002.2| 816|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p... 29 3.1
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p... 29 3.1
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 5.4
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 5.4
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 27 7.1
U50066-2|AAA93438.2| 202|Caenorhabditis elegans Hypothetical pr... 27 7.1
AF067216-10|AAC17519.1| 492|Caenorhabditis elegans Hypothetical... 27 7.1
>Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical
protein ZC410.2 protein.
Length = 458
Score = 177 bits (432), Expect = 3e-45
Identities = 83/129 (64%), Positives = 103/129 (79%)
Frame = +2
Query: 182 VNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTS 361
V VP T +T L NG R+ATE++G +TAT+G++IDAGSRYE KNNG AHFLEHMAFKGT
Sbjct: 25 VFVPETIVTTLPNGFRVATENTGGSTATIGVFIDAGSRYENEKNNGTAHFLEHMAFKGTP 84
Query: 362 KRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIE 541
+R++ LEL VEN+GAHLNAYTSRE T +YAKC + +V+IL+DI+ NSSLA +IE
Sbjct: 85 RRTRMGLELEVENIGAHLNAYTSRESTTYYAKCFTEKLDQSVDILSDILLNSSLATKDIE 144
Query: 542 RERGVILRE 568
ERGVI+RE
Sbjct: 145 AERGVIIRE 153
>U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical
protein F56D2.1 protein.
Length = 471
Score = 150 bits (364), Expect = 6e-37
Identities = 71/159 (44%), Positives = 105/159 (66%)
Frame = +2
Query: 92 LKVATTLRVISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVG 271
L++A + + + +QVR ++A + K L + P ++T L NG R+ TED+G+ATATVG
Sbjct: 3 LRLAVSSALRPALNSQVRNASSAVSVKDVLASAPQAEVTTLKNGFRVVTEDNGSATATVG 62
Query: 272 LWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVFY 451
+WI+ GSR+E KNNGVAHFLE + KGT KR+ LE + +GA LN++T R+QT +
Sbjct: 63 VWIETGSRFENEKNNGVAHFLERLIHKGTGKRASAALESELNAIGAKLNSFTERDQTAVF 122
Query: 452 AKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILRE 568
+ A DV V+ILAD+++NS L I+ ER +L+E
Sbjct: 123 VQAGAQDVEKVVDILADVLRNSKLEASTIDTERVNLLKE 161
>AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondrial
processing peptidasealpha protein 1 protein.
Length = 477
Score = 60.9 bits (141), Expect = 6e-10
Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Frame = +2
Query: 197 TKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQT 376
+++T L NGL++ TED+ TVG+ I++G RYE G++ +E +A+ + S
Sbjct: 19 SRVTRLPNGLKVCTEDTYGDFVTVGVAIESGCRYENGFPFGISRIVEKLAYNSSESFSSR 78
Query: 377 D--LELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERER 550
D L EN G ++ ++R+ ++ A C + V + +L+D I E +E+ +
Sbjct: 79 DEVFAKLEENSGI-VDCQSTRDTMMYAASCHRDGVDSVIHVLSDTIWKPIFDEQSLEQAK 137
>Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/134 (24%), Positives = 60/134 (44%)
Frame = +2
Query: 116 VISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSR 295
++S V +AA K A V K TVL+NGLR+++ + AT+++ L AGSR
Sbjct: 1 MLSRPSGTVAKRFVSAAAKSAGVQ---EKTTVLENGLRVSSVELNGATSSIVLAFRAGSR 57
Query: 296 YETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDV 475
Y+ + G+ H + + + L G +L A ++R+ + +
Sbjct: 58 YQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQS 117
Query: 476 PVAVEILADIIQNS 517
V + +L + N+
Sbjct: 118 AVVLSLLGQLGNNA 131
>AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/134 (24%), Positives = 60/134 (44%)
Frame = +2
Query: 116 VISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSR 295
++S V +AA K A V K TVL+NGLR+++ + AT+++ L AGSR
Sbjct: 1 MLSRPSGTVAKRFVSAAAKSAGVQ---EKTTVLENGLRVSSVELNGATSSIVLAFRAGSR 57
Query: 296 YETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDV 475
Y+ + G+ H + + + L G +L A ++R+ + +
Sbjct: 58 YQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQS 117
Query: 476 PVAVEILADIIQNS 517
V + +L + N+
Sbjct: 118 AVVLSLLGQLGNNA 131
>Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical
protein T10B10.2 protein.
Length = 422
Score = 49.2 bits (112), Expect = 2e-06
Identities = 34/130 (26%), Positives = 54/130 (41%)
Frame = +2
Query: 152 ATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHF 331
A A+K A P K+ L NGL + T DS A + L AGSRYE + G++H
Sbjct: 8 AVRGAHKAATTK-PVEKVAKLGNGLTVGTIDSHKPIAHLVLAFRAGSRYEKANQAGLSHT 66
Query: 332 LEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQ 511
+ + + T + + + G L ++TSR+ V + +L +
Sbjct: 67 IRNFVGRDTQEYFGNTVVWTLSQTGGVLKSFTSRDLFGVSLTIPRESTSVGLSVLGQVAG 126
Query: 512 NSSLAEPEIE 541
N E+E
Sbjct: 127 NPGFKPWEVE 136
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 131 GNQVRTLATAAAYKQALVNVPPTKLTVLDNG-LRIATEDSGAATATVGLWIDAG 289
GN + LAT A AL N P K G + A +G+A+A + D+G
Sbjct: 261 GNNTKALATQAVLLTALGNSSPVKFNTGTTGVIAKAVGQNGSASAFQAVHADSG 314
>Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/106 (24%), Positives = 50/106 (47%)
Frame = +2
Query: 200 KLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTD 379
K TVL+NGLR+++ + AT+++ L AGSRY+ + G+ H + + +
Sbjct: 40 KTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLA 99
Query: 380 LELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNS 517
L G +L A ++R+ + + V + +L + N+
Sbjct: 100 LVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLLGQLGNNA 145
>AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/106 (24%), Positives = 50/106 (47%)
Frame = +2
Query: 200 KLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTD 379
K TVL+NGLR+++ + AT+++ L AGSRY+ + G+ H + + +
Sbjct: 40 KTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLA 99
Query: 380 LELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNS 517
L G +L A ++R+ + + V + +L + N+
Sbjct: 100 LVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLLGQLGNNA 145
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +2
Query: 212 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 385
L NG+R+ D + L + G + + G+AHF EHM F GT+K S+ +
Sbjct: 90 LTNGIRVLLVSDPTTDKSAAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYS 149
Query: 386 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 547
+ NAYTS + T ++ + +P A++ + E ERE
Sbjct: 150 KFLAAHAGSSNAYTSSDHTNYHFDVKPDQLPGALDRFVQFFLSPQFTESATERE 203
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +2
Query: 212 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 385
L NG+R+ D + L + G + + G+AHF EHM F GT+K S+ +
Sbjct: 31 LTNGIRVLLVSDPTTDKSAAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYS 90
Query: 386 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 547
+ NAYTS + T ++ + +P A++ + E ERE
Sbjct: 91 KFLAAHAGSSNAYTSSDHTNYHFDVKPDQLPGALDRFVQFFLSPQFTESATERE 144
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +2
Query: 212 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 385
L NG+R+ D + L + G + + G+AHF EHM F GT+K S+ +
Sbjct: 90 LTNGIRVLLVSDPTTDKSAAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYS 149
Query: 386 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 547
+ NAYTS + T ++ + +P A++ + E ERE
Sbjct: 150 KFLAAHAGSSNAYTSSDHTNYHFDVKPDQLPGALDRFVQFFLSPQFTESATERE 203
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +2
Query: 212 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 385
L NG+R+ D + L + G + + G+AHF EHM F GT+K S+ +
Sbjct: 90 LTNGIRVLLVSDPTTDKSAAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYS 149
Query: 386 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 547
+ NAYTS + T ++ + +P A++ + E ERE
Sbjct: 150 KFLAAHAGSSNAYTSSDHTNYHFDVKPDQLPGALDRFVQFFLSPQFTESATERE 203
>U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical
protein C28F5.4 protein.
Length = 856
Score = 48.0 bits (109), Expect = 5e-06
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = +2
Query: 212 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK--RSQTDL 382
L NGLR+ DS + V L + G + + G+AHF EHM F GT+K +
Sbjct: 32 LTNGLRVLLVSDSKTRVSAVALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSEREYF 91
Query: 383 ELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 547
+ L N G NAYT + T + + + + A++ A + E ERE
Sbjct: 92 KYLAANNG-DSNAYTDTDHTNYSFEVRSEKLYGALDRFAQFFLDPQFTESATERE 145
>AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical
protein T24C4.1 protein.
Length = 427
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Frame = +2
Query: 206 TVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLE 385
T L+NGL++ ++++ A + + L AGSRYE G+ H + + F G +S L+
Sbjct: 24 TKLNNGLKVVSQENNGAISQLILAFRAGSRYEKVTQPGLVHHVRN--FVGRDAQSYPGLQ 81
Query: 386 LLVEN--MGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVI 559
L+ + GA+LN++ +R+ + A+ IL + + E+E I
Sbjct: 82 LVWSSAASGANLNSFATRDIFGVQISVARDQAAYALSILGHVAAKPAFKPWELEDVTPTI 141
Query: 560 LRE 568
L +
Sbjct: 142 LAD 144
>Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = +2
Query: 212 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 385
L NG+R+ D + L ++ G + + G+AHF EHM F GT+K S+ +
Sbjct: 31 LTNGIRVLLVSDPTTDKSAAALDVNVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYF 90
Query: 386 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 547
+ NA T+ + T ++ + + +P A++ + E ERE
Sbjct: 91 KFLTAHAGRANANTATDHTNYFFEVKPDQLPGALDRFVQFFLSPQFTESATERE 144
>Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = +2
Query: 212 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 385
L NG+R+ D + L ++ G + + G+AHF EHM F GT+K S+ +
Sbjct: 31 LTNGIRVLLVSDPTTDKSAAALDVNVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYF 90
Query: 386 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 547
+ NA T+ + T ++ + + +P A++ + E ERE
Sbjct: 91 KFLTAHAGRANANTATDHTNYFFEVKPDQLPGALDRFVQFFLSPQFTESATERE 144
>U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical
protein C02G6.1 protein.
Length = 980
Score = 44.4 bits (100), Expect = 6e-05
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +2
Query: 212 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 385
L NG+R+ D + L + G + + G+AHF EHM F GT+K ++ +
Sbjct: 31 LTNGIRVLLVSDPTTDKSAAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPTENEYS 90
Query: 386 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 547
+ + H NA T+ + T ++ + + A++ + E ERE
Sbjct: 91 KFLTDNAGHRNAVTASDHTNYHFDVKPDQLRGALDRFVQFFLSPQFTESATERE 144
>U55372-1|AAA98002.2| 816|Caenorhabditis elegans Hypothetical
protein C02G6.2 protein.
Length = 816
Score = 44.0 bits (99), Expect = 8e-05
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +2
Query: 212 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTD--L 382
L NGLR+ D + V L + AG + + G+AHF EHM F GTSK +
Sbjct: 31 LTNGLRVLLVSDPTTDKSAVSLAVKAGHLMDPWELPGLAHFCEHMLFLGTSKYPLENEFT 90
Query: 383 ELLVENMGAHLNAYTSREQTVFY 451
+ L +N G++ NA T + T ++
Sbjct: 91 KFLSDNAGSY-NACTEPDHTYYH 112
>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
protein C53B4.4e protein.
Length = 1544
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +2
Query: 122 SSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYE 301
S+ + + AT AA K+ ++++ P K R T+ S ++ + DAGS Y+
Sbjct: 891 SASTRKAKIQATFAAGKKKVLDLMPQK--------RKNTDASDLNGESIEIGADAGSLYD 942
Query: 302 TSKNNGVAHFLEHMAFKGTSKRSQTD 379
T N + MA G K S +D
Sbjct: 943 TDTNRDPSIGRSPMAVVGKRKESPSD 968
>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
protein C53B4.4d protein.
Length = 1301
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +2
Query: 122 SSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYE 301
S+ + + AT AA K+ ++++ P K R T+ S ++ + DAGS Y+
Sbjct: 611 SASTRKAKIQATFAAGKKKVLDLMPQK--------RKNTDASDLNGESIEIGADAGSLYD 662
Query: 302 TSKNNGVAHFLEHMAFKGTSKRSQTD 379
T N + MA G K S +D
Sbjct: 663 TDTNRDPSIGRSPMAVVGKRKESPSD 688
>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical
protein C53B4.4c protein.
Length = 1304
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +2
Query: 122 SSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYE 301
S+ + + AT AA K+ ++++ P K R T+ S ++ + DAGS Y+
Sbjct: 611 SASTRKAKIQATFAAGKKKVLDLMPQK--------RKNTDASDLNGESIEIGADAGSLYD 662
Query: 302 TSKNNGVAHFLEHMAFKGTSKRSQTD 379
T N + MA G K S +D
Sbjct: 663 TDTNRDPSIGRSPMAVVGKRKESPSD 688
>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
C53B4.4b protein.
Length = 1586
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +2
Query: 122 SSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYE 301
S+ + + AT AA K+ ++++ P K R T+ S ++ + DAGS Y+
Sbjct: 891 SASTRKAKIQATFAAGKKKVLDLMPQK--------RKNTDASDLNGESIEIGADAGSLYD 942
Query: 302 TSKNNGVAHFLEHMAFKGTSKRSQTD 379
T N + MA G K S +D
Sbjct: 943 TDTNRDPSIGRSPMAVVGKRKESPSD 968
>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
C53B4.4a protein.
Length = 1584
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +2
Query: 122 SSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYE 301
S+ + + AT AA K+ ++++ P K R T+ S ++ + DAGS Y+
Sbjct: 891 SASTRKAKIQATFAAGKKKVLDLMPQK--------RKNTDASDLNGESIEIGADAGSLYD 942
Query: 302 TSKNNGVAHFLEHMAFKGTSKRSQTD 379
T N + MA G K S +D
Sbjct: 943 TDTNRDPSIGRSPMAVVGKRKESPSD 968
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 5.4
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = +2
Query: 95 KVATTLRVISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRI-ATEDSGAATATVG 271
K+ T+ +I +QG Q R++ + V P D G GAA A V
Sbjct: 1901 KITQTIEIIRTQGKQYRSVILSNDQSPTAVVTPVAIAVDADKGYVFWLDRGGGAADAKVA 1960
Query: 272 LWIDAGSRYETSKNNGVAHFLEHMAFKGTSKR 367
GS +N +A L+H+A T+ R
Sbjct: 1961 RAGLDGSNPLVIASNDLAE-LDHIAIDTTNTR 1991
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 5.4
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = +2
Query: 95 KVATTLRVISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRI-ATEDSGAATATVG 271
K+ T+ +I +QG Q R++ + V P D G GAA A V
Sbjct: 1901 KITQTIEIIRTQGKQYRSVILSNDQSPTAVVTPVAIAVDADKGYVFWLDRGGGAADAKVA 1960
Query: 272 LWIDAGSRYETSKNNGVAHFLEHMAFKGTSKR 367
GS +N +A L+H+A T+ R
Sbjct: 1961 RAGLDGSNPLVIASNDLAE-LDHIAIDTTNTR 1991
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 429 PGNKQFFTQNASLMTSP*Q*RSLLISY-RIPPSPNPKSNENAVS 557
P N F QN+S+ SP Q R + +S +PP + + ++A+S
Sbjct: 141 PSNTAFKEQNSSMPLSPAQERWISMSIGAVPPPTSSAAEKDAIS 184
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 429 PGNKQFFTQNASLMTSP*Q*RSLLISY-RIPPSPNPKSNENAVS 557
P N F QN+S+ SP Q R + +S +PP + + ++A+S
Sbjct: 108 PSNTAFKEQNSSMPLSPAQERWISMSIGAVPPPTSSAAEKDAIS 151
>U50066-2|AAA93438.2| 202|Caenorhabditis elegans Hypothetical
protein T14A8.2 protein.
Length = 202
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 273 SPTVAVAAPESSVAIRKPLSSTVSLVGGTFTNACLYAAAV 154
S T + ++ E S + P+SS S V F C+Y A+
Sbjct: 163 SETSSSSSEEPSTSSETPVSSATSFVSSLFVLVCVYLIAM 202
>AF067216-10|AAC17519.1| 492|Caenorhabditis elegans Hypothetical
protein C35E7.3 protein.
Length = 492
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 70 YKDHNKNVESSNHFESNFQPGQSGTYVSNRSCIQTGISKC 189
YKD+ K ++ +F +F+ G++ Y+ N +Q KC
Sbjct: 282 YKDNCKKLDMPIYFGYHFEEGKTRKYLFNNRTLQFERIKC 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,154,297
Number of Sequences: 27780
Number of extensions: 277460
Number of successful extensions: 858
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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