Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12e04
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    26   0.26 
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              24   1.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.4  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    23   2.4  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   2.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   5.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   5.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.6  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   9.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.6  

>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +3

Query: 210 ACLAQSRVEPRLLESMMNGELIDDAALRKHVYCVL 314
           +CL +  +   L++ M  GE  DD  L+ +  C++
Sbjct: 39  SCLQKIAITEELVDGMRRGEFPDDHDLQCYTTCIM 73


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +3

Query: 207 DACLAQSRVEPRLLESMMNGELIDDAALRKHVYCV 311
           +AC  Q+ V    +E++ NG+  +   L+ ++YC+
Sbjct: 42  NACQTQTGVATVDIEAVRNGQWPETRQLKCYMYCL 76


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 502 CSTTCPPVAPLAATRRIIPSYLVPIPTYRC 591
           C  T   VAP+    R  P+Y    PT  C
Sbjct: 190 CDFTRDKVAPILVRARETPNYTACPPTLAC 219


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -1

Query: 344 PVLPDHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPR 237
           P+   +L   +D +  LP+ C+++ + +   L+ PR
Sbjct: 111 PIATKYLRRYEDNIF-LPEDCLLFTIELDRVLESPR 145


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -1

Query: 344 PVLPDHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPR 237
           P+   +L   +D +  LP+ C+++ + +   L+ PR
Sbjct: 126 PIATKYLRRYEDNIF-LPEDCLLFTIELDRVLESPR 160


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/40 (15%), Positives = 23/40 (57%)
 Frame = +3

Query: 213 CLAQSRVEPRLLESMMNGELIDDAALRKHVYCVLLSCKMI 332
           C+++       ++ +  G L+++ ++  ++YC+L +  ++
Sbjct: 45  CMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEAFSLV 84


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/40 (15%), Positives = 23/40 (57%)
 Frame = +3

Query: 213 CLAQSRVEPRLLESMMNGELIDDAALRKHVYCVLLSCKMI 332
           C+++       ++ +  G L+++ ++  ++YC+L +  ++
Sbjct: 45  CMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEAFSLV 84


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 422 RLQHLGDVTPGRSG 381
           RL+H GD +PG +G
Sbjct: 138 RLRHKGDGSPGGNG 151


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 422 RLQHLGDVTPGRSG 381
           RL+H GD +PG +G
Sbjct: 138 RLRHKGDGSPGGNG 151


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 413 HLGDVTPGRSGSQLPKY 363
           H G+V  G  G ++P+Y
Sbjct: 515 HSGEVVTGVIGHRMPRY 531


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 13/62 (20%), Positives = 24/62 (38%)
 Frame = +1

Query: 397 VTSPRCWRRAPSSPALVPRTWPGIYSDAATTGRRCCSTTCPPVAPLAATRRIIPSYLVPI 576
           + SP   + + S P   P+  P ++   +           PPV    +T  +   +L+P 
Sbjct: 806 ILSPVREKLSSSQPMQPPQQNPYMFLPVSYMSTTMAGVIYPPVIGTPSTGMMYKPFLIPE 865

Query: 577 PT 582
            T
Sbjct: 866 QT 867


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 146 RMQELCDIG*GREGDVSFSLRRLPR 220
           +++ LC++   R+G  S SL   PR
Sbjct: 116 KIKGLCEVPESRDGPPSVSLSSPPR 140


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 413 HLGDVTPGRSGSQLPKY 363
           H G+V  G  G ++P+Y
Sbjct: 515 HSGEVVTGVIGHRMPRY 531


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,232
Number of Sequences: 438
Number of extensions: 3061
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)