Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12e03
(633 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66875-1|AAC51328.1| 97|Homo sapiens cytochrome oxidase subuni... 69 1e-11
BC029818-1|AAH29818.1| 97|Homo sapiens cytochrome c oxidase su... 69 1e-11
M83308-1|AAA52062.1| 97|Homo sapiens cytochrome c oxidase subu... 67 6e-11
AF020589-1|AAC98895.1| 86|Homo sapiens cytochrome C oxidase su... 64 4e-10
X15341-1|CAA33392.1| 86|Homo sapiens protein ( Human COX VIa-L... 59 1e-08
U83702-1|AAD00554.1| 86|Homo sapiens cytochrome c oxidase subu... 59 1e-08
BC107861-1|AAI07862.1| 109|Homo sapiens cytochrome c oxidase su... 59 1e-08
BC070186-1|AAH70186.1| 109|Homo sapiens cytochrome c oxidase su... 59 1e-08
BC007723-1|AAH07723.1| 109|Homo sapiens cytochrome c oxidase su... 59 1e-08
AL160264-2|CAI20472.1| 109|Homo sapiens protein ( Human DNA seq... 59 1e-08
AL021546-1|CAA16494.1| 109|Homo sapiens cytochrome c oxidase su... 59 1e-08
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 34 0.36
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 33 0.64
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 33 1.1
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 33 1.1
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 33 1.1
BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated prot... 31 2.6
AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated prot... 31 2.6
AK128066-1|BAC87258.1| 652|Homo sapiens protein ( Homo sapiens ... 31 4.5
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 30 5.9
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 30 5.9
M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen ... 30 5.9
BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein. 30 5.9
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 30 5.9
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 30 5.9
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 30 5.9
AB209155-1|BAD92392.1| 699|Homo sapiens serine/threonine kinase... 30 7.8
>U66875-1|AAC51328.1| 97|Homo sapiens cytochrome oxidase subunit
VIa heart isoform precursor protein.
Length = 97
Score = 69.3 bits (162), Expect = 1e-11
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = +1
Query: 310 HGKDTWEKYRNFTYFVLLPLIAIQSFNAL---GHEPPPKGPCRDYEYMRVRTKRFPWGDG 480
HG +R T+ + LP +A+ +FN+ GH P P+ R Y+++R+RTK +PWGDG
Sbjct: 20 HGGAGARTWRLLTFVLALPSVALCTFNSYLHSGHRPRPE--FRPYQHLRIRTKPYPWGDG 77
Query: 481 VKSFYHNEHVNHLPGECEAP 540
+ +HN HVN LP E P
Sbjct: 78 NHTLFHNSHVNPLPTGYEHP 97
>BC029818-1|AAH29818.1| 97|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 2 protein.
Length = 97
Score = 69.3 bits (162), Expect = 1e-11
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = +1
Query: 310 HGKDTWEKYRNFTYFVLLPLIAIQSFNAL---GHEPPPKGPCRDYEYMRVRTKRFPWGDG 480
HG +R T+ + LP +A+ +FN+ GH P P+ R Y+++R+RTK +PWGDG
Sbjct: 20 HGGAGARTWRLLTFVLALPSVALCTFNSYLHSGHRPRPE--FRPYQHLRIRTKPYPWGDG 77
Query: 481 VKSFYHNEHVNHLPGECEAP 540
+ +HN HVN LP E P
Sbjct: 78 NHTLFHNSHVNPLPTGYEHP 97
>M83308-1|AAA52062.1| 97|Homo sapiens cytochrome c oxidase subunit
VIa protein.
Length = 97
Score = 66.9 bits (156), Expect = 6e-11
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 310 HGKDTWEKYRNFTYFVLLPLIAIQSFNALGHEPPPKGP-CRDYEYMRVRTKRFPWGDGVK 486
HG +R T+ + LP +A+ +FN+ H + P R Y+++R+RTK +PWGDG
Sbjct: 20 HGGAGARTWRLLTFVLALPSVALCTFNSYLHSGHRERPEFRPYQHLRIRTKPYPWGDGNH 79
Query: 487 SFYHNEHVNHLPGECEAP 540
+ +HN HVN LP E P
Sbjct: 80 TLFHNSHVNPLPTGYEHP 97
>AF020589-1|AAC98895.1| 86|Homo sapiens cytochrome C oxidase
subunit VIa homolog protein.
Length = 86
Score = 64.1 bits (149), Expect = 4e-10
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 310 HGKD-TWEKYRNFTYFVLLPLIAIQSFNAL---GHEPPPKGPCRDYEYMRVRTKRFPWGD 477
HG++ + ++ TYFV LP + + N HE + P Y ++R+RTK FPWGD
Sbjct: 6 HGEEGSARMWKALTYFVALPGVGVSMLNVFLKSRHEEHERPPFVAYPHLRIRTKPFPWGD 65
Query: 478 GVKSFYHNEHVNHLP 522
G + +HN HVN LP
Sbjct: 66 GNHTLFHNPHVNPLP 80
>X15341-1|CAA33392.1| 86|Homo sapiens protein ( Human COX VIa-L
mRNA for cytochrome c oxidase liver-specific subunitVIa
(EC 1.9.3.1). ).
Length = 86
Score = 58.8 bits (136), Expect = 1e-08
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 310 HGKD-TWEKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 477
HG++ + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 6 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 65
Query: 478 GVKSFYHNEHVNHLP 522
G + +HN HVN LP
Sbjct: 66 GNHTLFHNPHVNPLP 80
>U83702-1|AAD00554.1| 86|Homo sapiens cytochrome c oxidase subunit
VIa protein.
Length = 86
Score = 58.8 bits (136), Expect = 1e-08
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 310 HGKD-TWEKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 477
HG++ + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 6 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 65
Query: 478 GVKSFYHNEHVNHLP 522
G + +HN HVN LP
Sbjct: 66 GNHTLFHNPHVNPLP 80
>BC107861-1|AAI07862.1| 109|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 1 protein.
Length = 109
Score = 58.8 bits (136), Expect = 1e-08
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 310 HGKD-TWEKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 477
HG++ + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 29 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 88
Query: 478 GVKSFYHNEHVNHLP 522
G + +HN HVN LP
Sbjct: 89 GNHTLFHNPHVNPLP 103
>BC070186-1|AAH70186.1| 109|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 1 protein.
Length = 109
Score = 58.8 bits (136), Expect = 1e-08
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 310 HGKD-TWEKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 477
HG++ + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 29 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 88
Query: 478 GVKSFYHNEHVNHLP 522
G + +HN HVN LP
Sbjct: 89 GNHTLFHNPHVNPLP 103
>BC007723-1|AAH07723.1| 109|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 1 protein.
Length = 109
Score = 58.8 bits (136), Expect = 1e-08
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 310 HGKD-TWEKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 477
HG++ + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 29 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 88
Query: 478 GVKSFYHNEHVNHLP 522
G + +HN HVN LP
Sbjct: 89 GNHTLFHNPHVNPLP 103
>AL160264-2|CAI20472.1| 109|Homo sapiens protein ( Human DNA
sequence from clone RP3-405J24 on chromosome 6 Contains
the FDG2 gene for FGD1 family member 2, the gene for a
novel protein ).
Length = 109
Score = 58.8 bits (136), Expect = 1e-08
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 310 HGKD-TWEKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 477
HG++ + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 29 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 88
Query: 478 GVKSFYHNEHVNHLP 522
G + +HN HVN LP
Sbjct: 89 GNHTLFHNPHVNPLP 103
>AL021546-1|CAA16494.1| 109|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 1 protein.
Length = 109
Score = 58.8 bits (136), Expect = 1e-08
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 310 HGKD-TWEKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGD 477
HG++ + ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGD
Sbjct: 29 HGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGD 88
Query: 478 GVKSFYHNEHVNHLP 522
G + +HN HVN LP
Sbjct: 89 GNHTLFHNPHVNPLP 103
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 34.3 bits (75), Expect = 0.36
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 190 PPRPSKCGCPPKPGSGKVIVPPADCKPGP 276
PP P+ GCPP P PP +PGP
Sbjct: 19 PPPPAPFGCPPPPLPSPAFPPPLPQRPGP 47
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 33.5 bits (73), Expect = 0.64
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Frame = +1
Query: 178 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 276
S+ GPP +P G P PG G +PP+D C+PGP
Sbjct: 336 SIPGPPGLDGQPGAPGLPGPPGPGSPHIPPSDEICEPGP 374
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 32.7 bits (71), Expect = 1.1
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +1
Query: 172 RYSLCGPPRPSKC--GCPPKPGSGKVIVPPADCKPGPICY-NPCVP 300
RY LCGP P+ C P SG+ V C PG + CVP
Sbjct: 750 RYELCGPACPTSCNGAAAPSNCSGRPCVEGCVCLPGFVASGGACVP 795
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +1
Query: 193 PRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVPRFHHGKDTWE--KYRNFTYFVLLP 366
P P + PP P G+ PP KP + + PR HH D + R +++
Sbjct: 1011 PPPPQGQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPR-HHKSDPYSTGHLREAPSPLMIH 1069
Query: 367 LIAIQSFNALGHEPPPK 417
+ F +L H+ PP+
Sbjct: 1070 SPQMSQFQSLTHQSPPQ 1086
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 32.7 bits (71), Expect = 1.1
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +1
Query: 172 RYSLCGPPRPSKC--GCPPKPGSGKVIVPPADCKPGPICY-NPCVP 300
RY LCGP P+ C P SG+ V C PG + CVP
Sbjct: 750 RYELCGPACPTSCNGAAAPSNCSGRPCVEGCVCLPGFVASGGACVP 795
>BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated protein
10-11 protein.
Length = 298
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +1
Query: 151 WTVEKARRYSLCGPPRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVP 300
W V+ S C PP + C P P S ++ P C P C C P
Sbjct: 17 WQVDDCPE-SCCEPPCSAPSCCAPAP-SLSLVCTPVSCVSSPCCQAACEP 64
>AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated protein
protein.
Length = 298
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +1
Query: 151 WTVEKARRYSLCGPPRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVP 300
W V+ S C PP + C P P S ++ P C P C C P
Sbjct: 17 WQVDDCPE-SCCEPPCSAPSCCAPAP-SLSLVCTPVSCVSSPCCQAACEP 64
>AK128066-1|BAC87258.1| 652|Homo sapiens protein ( Homo sapiens
cDNA FLJ46186 fis, clone TESTI4005013. ).
Length = 652
Score = 30.7 bits (66), Expect = 4.5
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 178 SLCGPPRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCV 297
SL P+ + G PKP PP C GP C P +
Sbjct: 323 SLVNTPQHTPSG-QPKPAKAHTCPPPPSCLSGPSCMQPYI 361
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1685
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +1
Query: 178 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 276
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1691
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +1
Query: 178 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 276
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen
protein.
Length = 910
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +1
Query: 178 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 276
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein.
Length = 695
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +1
Query: 178 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 276
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 25 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 63
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +1
Query: 178 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 276
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +1
Query: 178 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 276
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +1
Query: 178 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 276
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>AB209155-1|BAD92392.1| 699|Homo sapiens serine/threonine kinase 23
variant protein.
Length = 699
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 217 PPKPGSGKVIVPPADCKPGPICYNPCVPRFHHGK 318
PP P S K+ + P D +P + PC R H K
Sbjct: 2 PPNPISPKLHIKPTDTRPLVLALEPCGSRGQHVK 35
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,523,318
Number of Sequences: 237096
Number of extensions: 2348101
Number of successful extensions: 7073
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6956
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -