Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12e01
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   3.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.1  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   6.1  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   6.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 600 STFLYFKWYIFIK*LLPKLQNTLKTNLI*KLKWKLLTRSLYP 475
           +T+L    Y+ +K   PK+    KT L   L +KLL    +P
Sbjct: 27  NTYLVLNKYLLVKHSKPKMPLLPKTPLPLTLLYKLLGIIQFP 68


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 523 PYIKTKMEIVDQIFVSFQGVIQITIYCYNN 434
           P +   + +V  I ++   +IQ+  YCY N
Sbjct: 193 PLLACGVMVVTHITMAHFKIIQVVPYCYIN 222


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 461 NYTLKGYKDLVNNFHFSFYI 520
           N+T K   +L   FHF+ Y+
Sbjct: 259 NFTNKQLTELEKEFHFNKYL 278


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 461 NYTLKGYKDLVNNFHFSFYI 520
           N+T K   +L   FHF+ Y+
Sbjct: 48  NFTNKQLTELEKEFHFNKYL 67


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 461 NYTLKGYKDLVNNFHFSFYI 520
           N+T K   +L   FHF+ Y+
Sbjct: 48  NFTNKQLTELEKEFHFNKYL 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,617
Number of Sequences: 336
Number of extensions: 2732
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)