Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12d18
         (713 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   2.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.8  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +1

Query: 409 HHQMQIVADNPNWSVSLNPQPVAISLASFLRFHAVTKISV 528
           HHQ    + NP    +    P   SL S L   AV   +V
Sbjct: 14  HHQQLFSSANPGTIQACTTSPATASLESSLSAAAVAAAAV 53


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 625 NRWIKTFKSNFFNTTDEIVQYLLH 696
           N W+  F  + +   +E  QY LH
Sbjct: 162 NNWLSVFWGSAWQWNEERKQYYLH 185


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 542 CKPIITEILVTAW 504
           C+P +T  +VT+W
Sbjct: 652 CQPGVTAFIVTSW 664


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,554
Number of Sequences: 438
Number of extensions: 3768
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)