Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12d16
(570 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 167 8e-43
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 150 2e-37
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 125 5e-30
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 119 3e-28
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 95 6e-21
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 74 2e-14
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 68 8e-13
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 64 1e-11
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 47 2e-06
SPBC83.06c |||mitochondrial ribosomal protein subunit L36|Schizo... 30 0.27
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 27 1.5
SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|... 25 5.9
SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase Met9|... 25 5.9
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 25 5.9
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 167 bits (407), Expect = 8e-43
Identities = 75/99 (75%), Positives = 82/99 (82%)
Frame = +3
Query: 273 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGD 452
+FDV A+G+PLGRIV KL D VPKTA NFRALCTGEKG+GY GS+FHR+IP FM QGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 453 FTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGP 569
FT NGTGGKSIYG F DENF LKH PG+LSMANAGP
Sbjct: 65 FTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGP 103
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 150 bits (363), Expect = 2e-37
Identities = 70/100 (70%), Positives = 77/100 (77%)
Frame = +3
Query: 270 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGG 449
VYFD+ E LGR+ I L VPKTAENFRAL TGEKGFGY+GS FHR+IP+FM QGG
Sbjct: 29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGG 88
Query: 450 DFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGP 569
D T +GTGGKSIYG F DENFKL H PG+LSMANAGP
Sbjct: 89 DITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGP 128
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 125 bits (301), Expect = 5e-30
Identities = 66/113 (58%), Positives = 77/113 (68%), Gaps = 7/113 (6%)
Frame = +3
Query: 249 STQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGE------KGFGYKGSS 410
ST+P V+ D+ DG LGRI I+L + VPKTAENFR CTGE K GYK S+
Sbjct: 2 STEP--VVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNST 59
Query: 411 FHRIIPDFMCQGGDFTNHNGTGGKSIY-GRTFSDENFKLKHTGPGILSMANAG 566
FHRII FM QGGDF + +GTG +I+ RTF DENF LKH PG+LSMANAG
Sbjct: 60 FHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAG 112
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 119 bits (287), Expect = 3e-28
Identities = 58/103 (56%), Positives = 71/103 (68%), Gaps = 4/103 (3%)
Frame = +3
Query: 273 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG----YKGSSFHRIIPDFMC 440
YF ++ DG+ I +L + VPKT +NF +LC G + G YKGS FHR+I +FM
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 441 QGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGP 569
QGGDFT NGTGG+SIYG F DENF+LKH P +LSMANAGP
Sbjct: 66 QGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGP 108
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 95.1 bits (226), Expect = 6e-21
Identities = 51/90 (56%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Frame = +3
Query: 303 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 482
LG+I+I+L T+ PKT +NF L ++G+ Y G FHR+IPDF+ QGGD T G GG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGT 65
Query: 483 SIYGRTFSDE-NFKLKHTGPGILSMANAGP 569
SIYG F DE + L HTG GILSMANAGP
Sbjct: 66 SIYGDKFDDEIHSDLHHTGAGILSMANAGP 95
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 73.7 bits (173), Expect = 2e-14
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +3
Query: 306 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 485
G I IKL +E PK +NF E G+ Y + FHRII +FM QGGD +GTGG+S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519
Query: 486 IYGRTFSDE-NFKLKHTGPGILSMANAGP 569
I+ + F DE + LKH P +SMAN+GP
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGP 548
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 68.1 bits (159), Expect = 8e-13
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +3
Query: 306 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 485
G I I+L+TD P NF L ++G+ Y+ + FHR I FM QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 486 IYGRTFSDENFK-LKHTGPGILSMANAG 566
I+G+ F DE LKH GI+SMAN G
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMANRG 368
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 64.1 bits (149), Expect = 1e-11
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 306 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 485
G I I+L EVPK NF LC +G+ Y G+ HR++P+F+ QGGD T G GG+S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGES 77
Query: 486 IYGRTFSDENF-KLKHTGPGILSMA 557
IYG F+ E +L+ G++ MA
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMA 102
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 46.8 bits (106), Expect = 2e-06
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Frame = +3
Query: 303 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 482
+G +VI L E PKT ENF LC K Y F+ I ++ CQ GD G GG+
Sbjct: 9 VGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGDGGR 65
Query: 483 SIYG------RTFSDE-NFKLKHTGPGILSMANA 563
++ R F E N L H G++SM+ A
Sbjct: 66 CVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTA 99
>SPBC83.06c |||mitochondrial ribosomal protein subunit
L36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 59
Score = 29.9 bits (64), Expect = 0.27
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 110 SKVYIVKYTGRIYLVCDENPNHDT 181
S Y V+ GR+Y++C ++P H T
Sbjct: 33 SSCYFVRRKGRLYVLCKKHPRHKT 56
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 27.5 bits (58), Expect = 1.5
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -1
Query: 315 LYVPMALRQQLHRNKLVYQVESKQNEVLQQSI 220
LYV +A R+++ R++L Q++++ LQQ +
Sbjct: 434 LYVALAQRKEVRRSQLEAQIQARNQFRLQQQV 465
>SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 376
Score = 25.4 bits (53), Expect = 5.9
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -2
Query: 395 PKTFFTSTQSSKV--LSSFRYFIRVQFYDYTSQWL 297
P FF + +++ L S R F+ FYD+T+++L
Sbjct: 16 PSQFFAGSSLNRLSFLRSNREFLNKAFYDHTTRFL 50
>SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase
Met9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 603
Score = 25.4 bits (53), Expect = 5.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 350 SFRYFIRVQFYDYTSQWLSVSSYIEI-NLFIRLSRSK 243
+ RY +R+ + T+ W S SY EI +LF R K
Sbjct: 363 AIRYGLRMSPKEITTSWGSPKSYSEIGDLFARYCEKK 399
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 25.4 bits (53), Expect = 5.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 345 KTAENFRALCTGEKGFGYKGSSFHRIIP 428
K A F A+C EKG Y +FH +P
Sbjct: 414 KQALIFDAICLLEKGITYSQHNFHLKLP 441
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,363,561
Number of Sequences: 5004
Number of extensions: 48678
Number of successful extensions: 147
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 242064240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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