Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12d08
(547 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 25 0.57
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 22 3.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.0
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 21 5.3
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 21 5.3
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 21 9.3
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 21 9.3
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 21 9.3
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 21 9.3
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 24.6 bits (51), Expect = 0.57
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 210 YTSKNCNYYSNWC 248
YT K+C Y +WC
Sbjct: 91 YTGKDCGEYVDWC 103
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 22.2 bits (45), Expect = 3.0
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = -3
Query: 494 YLINIMGYYFFGTVQ 450
+++ M Y+FFGT++
Sbjct: 82 FIVRFMKYHFFGTLK 96
Score = 20.6 bits (41), Expect = 9.3
Identities = 5/15 (33%), Positives = 8/15 (53%)
Frame = +3
Query: 252 FTRTTKTTFWFAVCC 296
+ T + +W VCC
Sbjct: 48 YNNTNRKYYWLNVCC 62
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.0
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = +3
Query: 240 NWCYFTRTTKTTFWFAVCCFCCRTGL 317
NW F +F + CF C++ +
Sbjct: 943 NWTSFYYNIIPILFFMLVCFTCKSNI 968
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.0
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = +3
Query: 240 NWCYFTRTTKTTFWFAVCCFCCRTGL 317
NW F +F + CF C++ +
Sbjct: 943 NWTSFYYNIIPILFFMLVCFTCKSNI 968
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.0
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = +3
Query: 240 NWCYFTRTTKTTFWFAVCCFCCRTGL 317
NW F +F + CF C++ +
Sbjct: 943 NWTSFYYNIIPILFFMLVCFTCKSNI 968
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.0
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = +3
Query: 240 NWCYFTRTTKTTFWFAVCCFCCRTGL 317
NW F +F + CF C++ +
Sbjct: 943 NWTSFYYNIIPILFFMLVCFTCKSNI 968
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 21.4 bits (43), Expect = 5.3
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +3
Query: 168 SCGTVQDFNETRTDYTSKNCNYYSN 242
+CG F+ + + ++NC+Y N
Sbjct: 53 TCGNGLAFDASDPKFLTENCDYIHN 77
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 21.4 bits (43), Expect = 5.3
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +3
Query: 168 SCGTVQDFNETRTDYTSKNCNYYSN 242
+CG F+ + + ++NC+Y N
Sbjct: 53 TCGNGLAFDASDPKFLTENCDYIHN 77
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 20.6 bits (41), Expect = 9.3
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 225 CNYYSNWCYF 254
C YS+W YF
Sbjct: 304 CELYSDWDYF 313
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 20.6 bits (41), Expect = 9.3
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 225 CNYYSNWCYF 254
C YS+W YF
Sbjct: 305 CELYSDWDYF 314
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 20.6 bits (41), Expect = 9.3
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 225 CNYYSNWCYF 254
C YS+W YF
Sbjct: 305 CELYSDWDYF 314
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 249 YFTRTTKTTFWFAVCC 296
Y T F+FA+CC
Sbjct: 67 YMYAFTHIFFFFAICC 82
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,274
Number of Sequences: 336
Number of extensions: 2590
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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