Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12d03
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.3  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.3  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   6.9  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 342 SQRPSAFSESLADSLIFPARSFVS 271
           S + S  SESL + ++FP   F+S
Sbjct: 350 SVKCSIQSESLLNDILFPVAGFIS 373


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 470 SAYCTQTHPPLQRTSPLPIKP 532
           + +    +PPL +  PLP+ P
Sbjct: 167 TGFLCNNYPPLPQVPPLPLPP 187


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 357 HCLLQSQRPSAFSESLADSLIFP 289
           HCLLQ Q+ +  + + A +L+ P
Sbjct: 88  HCLLQEQQQAGANMAAAANLLRP 110


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 407 ETNLILTSTFHLSSNI 360
           +T L+ T TFH SSN+
Sbjct: 117 KTTLLNTLTFHTSSNL 132


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 407 ETNLILTSTFHLSSNI 360
           +T L+ T TFH SSN+
Sbjct: 117 KTTLLNTLTFHTSSNL 132


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 224 SHLYTEYKKYQTMH 265
           SH YT Y   Q MH
Sbjct: 234 SHKYTNYSAVQEMH 247


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 294 KLTNLPKILKRLKVSVIGEDSADV*GQ 374
           K+T+L K   +LKV +    +ADV GQ
Sbjct: 88  KVTDLKKRFPKLKVLLSVGGNADVSGQ 114


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 418 SSYACCNPKYWVRKHMYFRLLYANTSALATY 510
           +S +C N   +    MYFR+ + +   L  Y
Sbjct: 206 TSQSCENATLYSGDEMYFRVAFPSVFTLIDY 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,755
Number of Sequences: 336
Number of extensions: 3231
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)