Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12d03
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           29   0.13 
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          29   0.18 
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          29   0.18 
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          29   0.18 
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   8.8  

>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 29.1 bits (62), Expect = 0.13
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
           G+G SH    Y+ Y   HA L  DLAG+
Sbjct: 157 GDGVSHTVPIYEGYALPHAILRMDLAGR 184


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
           G+G SH    Y+ Y   HA L  DLAG+
Sbjct: 157 GDGVSHTVPIYEGYALPHAILRLDLAGR 184


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
           G+G SH    Y+ Y   HA L  DLAG+
Sbjct: 157 GDGVSHTVPIYEGYALPHAILRLDLAGR 184


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
           G+G SH    Y+ Y   HA L  DLAG+
Sbjct: 157 GDGVSHTVPIYEGYALPHAILRLDLAGR 184


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 467 ISAYCTQTHPPLQRTSPLP 523
           + AY   THPP++ T  +P
Sbjct: 417 LEAYWRATHPPVRPTPSVP 435


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,571
Number of Sequences: 2352
Number of extensions: 11459
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)