Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12d03
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 32 0.43
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 32 0.43
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 32 0.43
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 32 0.43
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 32 0.43
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip... 32 0.43
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 32 0.43
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 32 0.43
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 32 0.43
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 32 0.43
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z12017-2|CAA78048.1| 455|Caenorhabditis elegans Hypothetical pr... 28 5.3
U53151-4|AAB37066.1| 335|Caenorhabditis elegans Hypothetical pr... 28 5.3
AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical... 28 6.9
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 28 6.9
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 27 9.2
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 27 9.2
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 27 9.2
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 27 9.2
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 27 9.2
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 27 9.2
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 27 9.2
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 27 9.2
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 227 HLYTEYKKYQTMHAQLTKDLAGKINESAKDSEKAEGLCDWRRQCG 361
HL+TE K++QT + DL K+ +A D E+ E ++++ G
Sbjct: 103 HLWTEQKRFQTGDSMFDDDLMNKLKVAA-DKEREENESEFQKTLG 146
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 227 HLYTEYKKYQTMHAQLTKDLAGKINESAKDSEKAEGLCDWRRQCG 361
HL+TE K++QT + DL K+ +A D E+ E ++++ G
Sbjct: 93 HLWTEQKRFQTGDSMFDDDLMNKLKVAA-DKEREENESEFQKTLG 136
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 227 HLYTEYKKYQTMHAQLTKDLAGKINESAKDSEKAEGLCDWRRQCG 361
HL+TE K++QT + DL K+ +A D E+ E ++++ G
Sbjct: 149 HLWTEQKRFQTGDSMFDDDLMNKLKVAA-DKEREENESEFQKTLG 192
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 227 HLYTEYKKYQTMHAQLTKDLAGKINESAKDSEKAEGLCDWRRQCG 361
HL+TE K++QT + DL K+ +A D E+ E ++++ G
Sbjct: 103 HLWTEQKRFQTGDSMFDDDLMNKLKVAA-DKEREENESEFQKTLG 146
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 227 HLYTEYKKYQTMHAQLTKDLAGKINESAKDSEKAEGLCDWRRQCG 361
HL+TE K++QT + DL K+ +A D E+ E ++++ G
Sbjct: 103 HLWTEQKRFQTGDSMFDDDLMNKLKVAA-DKEREENESEFQKTLG 146
>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform g protein.
Length = 1713
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 227 HLYTEYKKYQTMHAQLTKDLAGKINESAKDSEKAEGLCDWRRQCG 361
HL+TE K++QT + DL K+ +A D E+ E ++++ G
Sbjct: 103 HLWTEQKRFQTGDSMFDDDLMNKLKVAA-DKEREENESEFQKTLG 146
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 227 HLYTEYKKYQTMHAQLTKDLAGKINESAKDSEKAEGLCDWRRQCG 361
HL+TE K++QT + DL K+ +A D E+ E ++++ G
Sbjct: 103 HLWTEQKRFQTGDSMFDDDLMNKLKVAA-DKEREENESEFQKTLG 146
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 227 HLYTEYKKYQTMHAQLTKDLAGKINESAKDSEKAEGLCDWRRQCG 361
HL+TE K++QT + DL K+ +A D E+ E ++++ G
Sbjct: 103 HLWTEQKRFQTGDSMFDDDLMNKLKVAA-DKEREENESEFQKTLG 146
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 227 HLYTEYKKYQTMHAQLTKDLAGKINESAKDSEKAEGLCDWRRQCG 361
HL+TE K++QT + DL K+ +A D E+ E ++++ G
Sbjct: 93 HLWTEQKRFQTGDSMFDDDLMNKLKVAA-DKEREENESEFQKTLG 136
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 227 HLYTEYKKYQTMHAQLTKDLAGKINESAKDSEKAEGLCDWRRQCG 361
HL+TE K++QT + DL K+ +A D E+ E ++++ G
Sbjct: 149 HLWTEQKRFQTGDSMFDDDLMNKLKVAA-DKEREENESEFQKTLG 192
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical protein
F57C7.1a protein.
Length = 1209
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 494 PPLQRTSPLPIKPDMDMDTPEKKPAM 571
P ++ +PL I ++ DTPEKKP M
Sbjct: 1106 PQQKKKAPLSILDELLPDTPEKKPVM 1131
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
T08G11.1b protein.
Length = 3185
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 449 GFENTCISAYCTQTHPPLQRTSPLPIKPDMDMDTPEKK 562
G ++ S Y HPPL+ + LP D++++ PE+K
Sbjct: 2119 GIDDQTTSIYHVHLHPPLEFHNNLPF--DINIELPEQK 2154
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
T08G11.1a protein.
Length = 3212
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 449 GFENTCISAYCTQTHPPLQRTSPLPIKPDMDMDTPEKK 562
G ++ S Y HPPL+ + LP D++++ PE+K
Sbjct: 2119 GIDDQTTSIYHVHLHPPLEFHNNLPF--DINIELPEQK 2154
>Z12017-2|CAA78048.1| 455|Caenorhabditis elegans Hypothetical
protein R08D7.2 protein.
Length = 455
Score = 28.3 bits (60), Expect = 5.3
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Frame = +3
Query: 141 VRVKLRTLNFNLE-WLIKLIR------TLRLVRE-LRISIPNIRNIKLCMLS*QKILPEK 296
+ KL+T+ E WL+ LI+ T +LVRE R + I + LS +K+ EK
Sbjct: 271 IHSKLKTMEKAKEAWLVDLIKSWFTPETRKLVREGARPTGGAAEQILMDFLSGKKVDAEK 330
Query: 297 LTNLPKILK 323
L NLP + K
Sbjct: 331 LVNLPNLDK 339
>U53151-4|AAB37066.1| 335|Caenorhabditis elegans Hypothetical
protein T05B11.1 protein.
Length = 335
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 538 HIRFYWQRARTLQGRMCLRTISGNTCVFEPSIL 440
HIR W + L RM ++ + + C F PS++
Sbjct: 159 HIRLSWTQFMDLLSRMTIKHLYIDFCTFHPSLI 191
>AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical
protein Y47H9C.5b protein.
Length = 318
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 248 KYQTMHAQLTKDLAGKINESAKDSEKAEGLC 340
++ ++ Q+ K+LAGK+N + D ++ G+C
Sbjct: 234 QFAPIYDQIAKELAGKVNFAKIDCDQWPGVC 264
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 248 KYQTMHAQLTKDLAGKINESAKDSEKAEGLC 340
++ ++ Q+ K+LAGK+N + D ++ G+C
Sbjct: 704 QFAPIYDQIAKELAGKVNFAKIDCDQWPGVC 734
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
G+G +H Y+ Y HA L DLAG+
Sbjct: 157 GDGVTHTVPIYEGYALPHAILRLDLAGR 184
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
G+G +H Y+ Y HA L DLAG+
Sbjct: 157 GDGVTHTVPIYEGYALPHAILRLDLAGR 184
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
G+G +H Y+ Y HA L DLAG+
Sbjct: 157 GDGVTHTVPIYEGYALPHAILRLDLAGR 184
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
G+G +H Y+ Y HA L DLAG+
Sbjct: 157 GDGVTHTVPIYEGYALPHAILRLDLAGR 184
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
G+G +H Y+ Y HA L DLAG+
Sbjct: 157 GDGVTHTVPIYEGYALPHAILRLDLAGR 184
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
G+G +H Y+ Y HA L DLAG+
Sbjct: 157 GDGVTHTVPIYEGYALPHAILRLDLAGR 184
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
G+G +H Y+ Y HA L DLAG+
Sbjct: 157 GDGVTHTVPIYEGYALPHAILRLDLAGR 184
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
G+G +H Y+ Y HA L DLAG+
Sbjct: 113 GDGVTHTVPIYEGYALPHAILRLDLAGR 140
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
G+G +H Y+ Y HA L DLAG+
Sbjct: 143 GDGVTHTVPIYEGYALPHAILRLDLAGR 170
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 212 GEGTSHLYTEYKKYQTMHAQLTKDLAGK 295
G+G +H Y+ Y HA L DLAG+
Sbjct: 157 GDGVTHTVPIYEGYALPHAILRLDLAGR 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,378,640
Number of Sequences: 27780
Number of extensions: 293665
Number of successful extensions: 807
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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