Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12d02
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   5.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.8  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 125 DLNLCSKVNFITDNGRDDG 181
           D NLC+ VN+      DDG
Sbjct: 46  DANLCTHVNYAFLGLNDDG 64


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 637 TSLQVLRNNDLGIFFAK 587
           TS ++  NND+ +FF K
Sbjct: 217 TSKEIALNNDVLLFFVK 233


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 461 ESCRYNVCSVIWNIVHSGDYCFVARLTR 378
           E+  Y+V  ++W+IV +    F+  L R
Sbjct: 243 ETVAYSVIFILWHIVGTFSGIFLCDLIR 270


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 216 IVHMVAVIPFYFPSSRPLS 160
           ++ ++  I F FP S PLS
Sbjct: 524 VISLIDEISFTFPPSPPLS 542


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,899
Number of Sequences: 336
Number of extensions: 3205
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)