Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12d01
         (637 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0JI68 Cluster: Os01g0820300 protein; n=1; Oryza sativa...    36   1.1  
UniRef50_A7T7N1 Cluster: Predicted protein; n=3; Nematostella ve...    33   4.4  
UniRef50_Q5NT10 Cluster: Small GTPase EhRabX6; n=2; Entamoeba hi...    33   5.8  
UniRef50_A2EWR1 Cluster: SAC3/GANP family protein; n=1; Trichomo...    33   5.8  
UniRef50_Q02308 Cluster: Protein hairless; n=6; Drosophila melan...    33   5.8  
UniRef50_Q6M9Z9 Cluster: Ribosome recycling factor; n=1; Candida...    33   7.6  

>UniRef50_Q0JI68 Cluster: Os01g0820300 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os01g0820300 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 1333

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
 Frame = +3

Query: 372 STKIRPLRRTAEETENRRV---QKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQE 542
           S+K+  L +  EE E +RV   ++T+A  L       LK ++ ++I ++  KV D    E
Sbjct: 5   SSKLDLLLKMVEENEKKRVVADERTRAEYLE------LKKMVESRIPAVERKVED--IGE 56

Query: 543 FGECANTRTLSVESTVEQQIESSK 614
             +  NT+   +EST+++QI++ K
Sbjct: 57  AFQAMNTKVDLIESTLQRQIKTEK 80


>UniRef50_A7T7N1 Cluster: Predicted protein; n=3; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 166

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
 Frame = -2

Query: 240 CTWRYGWILYFFDTNCNAGGWWWRLFYRNPWTYFDTSFFLL-----FYSLQGARVWW 85
           CTW   W +Y++      G  WW ++Y   W+ +D +++ +     ++S+ G+  WW
Sbjct: 30  CTW---WSVYYYTWWSVFGCTWWSVYYYTLWSVYDCTWWSVLCDCTWWSVCGS-TWW 82


>UniRef50_Q5NT10 Cluster: Small GTPase EhRabX6; n=2; Entamoeba
           histolytica|Rep: Small GTPase EhRabX6 - Entamoeba
           histolytica
          Length = 200

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +3

Query: 405 EETENRRVQKTKATVL---RVTMDRILKTVINNKIDSMIEKVRDKFCQEFGECANTRTLS 575
           +ETE   +Q  K  +    R    + LK ++ NKIDS  +K+ ++ C+E  +  N     
Sbjct: 84  DETEKDSIQNCKNWLSYGDRYIGSQYLKLIVGNKIDSNDKKISEEECEEVAKSLNCEYFE 143

Query: 576 VESTVEQQIE 605
           V +   + I+
Sbjct: 144 VSAKTGEGIK 153


>UniRef50_A2EWR1 Cluster: SAC3/GANP family protein; n=1; Trichomonas
           vaginalis G3|Rep: SAC3/GANP family protein - Trichomonas
           vaginalis G3
          Length = 560

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = +3

Query: 393 RRTAEETENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRD 527
           ++  ++TEN+  +  K+ ++   +D  LKT+ NNKI   +EK  D
Sbjct: 248 KQEEQKTENKSNKSNKSPLIESLLDMDLKTLSNNKIFKGLEKKND 292


>UniRef50_Q02308 Cluster: Protein hairless; n=6; Drosophila
            melanogaster|Rep: Protein hairless - Drosophila
            melanogaster (Fruit fly)
          Length = 1077

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = +3

Query: 24   HTYNKLTHENLQCRTST*ATSTKPLHLATNKTKGKSWYQNMSKDSCRTTATTSP 185
            HT+  L H +     +   T   P HLAT K    S  Q MS  S   TA+TSP
Sbjct: 983  HTHPHLAHPHQHPHPAALTTHHSPAHLATPKLTDSSTDQ-MSATSSHRTASTSP 1035


>UniRef50_Q6M9Z9 Cluster: Ribosome recycling factor; n=1; Candidatus
           Protochlamydia amoebophila UWE25|Rep: Ribosome recycling
           factor - Protochlamydia amoebophila (strain UWE25)
          Length = 183

 Score = 32.7 bits (71), Expect = 7.6
 Identities = 23/83 (27%), Positives = 41/83 (49%)
 Frame = +3

Query: 336 LAWLCAQPFTSTSTKIRPLRRTAEETENRRVQKTKATVLRVTMDRILKTVINNKIDSMIE 515
           +A +C +    T   IR +RR A E    R QK++  +     + +LK     K++  I+
Sbjct: 111 MAKICHEEKEKTKVSIRNIRRDANELA--RKQKSEGIIA----EDVLK-----KLEKNIQ 159

Query: 516 KVRDKFCQEFGECANTRTLSVES 584
           ++ DKFC+E  E A  +   + +
Sbjct: 160 ELTDKFCKEADEIAEKKEKEIST 182


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,705,745
Number of Sequences: 1657284
Number of extensions: 11364635
Number of successful extensions: 39656
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39583
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)