Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12c22
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1075 + 34350155-34350709 32 0.40
04_04_0046 + 22344503-22345075 31 0.93
08_02_1052 - 23962374-23963369 25 1.2
07_01_0879 - 7290890-7291694,7291810-7291943,7292089-7292227,729... 30 1.6
03_03_0199 - 15363680-15363739,15363879-15364070,15364154-153646... 29 2.1
01_05_0298 + 20591470-20591892,20592696-20592892,20594446-20594707 29 2.8
10_08_0156 - 15282111-15282752,15284787-15285719 29 3.7
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779... 29 3.7
04_01_0373 - 4913283-4913669 28 5.0
03_04_0180 + 18173005-18173976,18174066-18174170 28 5.0
01_03_0152 + 13248027-13248419 28 5.0
11_01_0338 + 2522698-2523213 28 6.5
09_01_0084 + 1202545-1202755,1202797-1203488 28 6.5
07_03_1086 + 23858419-23859423,23859527-23859610 28 6.5
06_01_0805 + 6043248-6043551,6043654-6043755,6044858-6044964,604... 28 6.5
05_06_0278 + 26894802-26895362 28 6.5
03_01_0065 + 529200-529438,529770-529929,530217-530299,530398-53... 28 6.5
02_04_0598 + 24216556-24216636,24217871-24217956,24218083-24218251 28 6.5
01_07_0197 + 41912207-41912652,41913226-41913800,41913828-419157... 28 6.5
06_03_1083 + 27478595-27478996 25 8.6
11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,337... 27 8.7
09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697... 27 8.7
05_06_0124 - 25822176-25822633,25822738-25825420 27 8.7
04_04_0754 + 27803143-27803517,27805441-27806832,27806910-278071... 27 8.7
03_04_0140 + 17638335-17638583,17638843-17639061,17639206-176394... 27 8.7
>01_06_1075 + 34350155-34350709
Length = 184
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +3
Query: 438 GGGGDGERAVALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIGH 575
GGGG GE A A A + P A A+P A + AA L GH
Sbjct: 87 GGGGGGELAAASDGAGEPGPGAAAASPDTGAAAASDAADALVAAGH 132
>04_04_0046 + 22344503-22345075
Length = 190
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +3
Query: 315 SAVCRMMAGAAPRRTQQLLDGSLRPRFNRASIICGKERALEGGGGDGERAVALYMACKHL 494
SA C A +R + + ++RP AS+ + A GGGG+G R + +A +
Sbjct: 31 SACCGGGASGKRQRARARVAAAMRPADAAASVA---QAASPGGGGEGTRRPRVLVAGGGI 87
Query: 495 PAAVLAAPGERAG 533
VLA R G
Sbjct: 88 GGLVLALAARRKG 100
>08_02_1052 - 23962374-23963369
Length = 331
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 571 PIFCSVAAAWASMPARSPGAANTAAGR 491
P SVA+ WA+ PGAA GR
Sbjct: 95 PAAPSVASWWATTARYHPGAARLTLGR 121
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 412 IIDARLNLGRRLPSSSCCVL 353
++DA L+LGRRL +S L
Sbjct: 123 VLDASLSLGRRLSETSLAAL 142
>07_01_0879 -
7290890-7291694,7291810-7291943,7292089-7292227,
7292338-7292585
Length = 441
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 372 DGSLRPRFNRASIICGKERALEGGGGDGERA 464
+G RPR A + G+E A GGGG E A
Sbjct: 8 NGKRRPRKAAAEAVDGQEEACRGGGGAAEAA 38
>03_03_0199 -
15363680-15363739,15363879-15364070,15364154-15364605,
15364699-15365101
Length = 368
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +3
Query: 426 RALEGGGGDGERAVALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIGHRSXLPH 593
RAL GGG G AV C+H A++ A PG R AQ + ++G R H
Sbjct: 7 RALGFGGGGGCGAVR----CRHCSASLPAMPGARVIQCAQCYG-VTRVGGRGRRRH 57
>01_05_0298 + 20591470-20591892,20592696-20592892,20594446-20594707
Length = 293
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 182 VGGHLRPQVESRPASTAASLSTGPSLSEEAVTELTVGYIS 301
VGG + PA+ AA+ + G S+ E+ V E+T +S
Sbjct: 69 VGGEQKKAPGPSPAAAAAAAAAGASMMEQLVPEITTHALS 108
>10_08_0156 - 15282111-15282752,15284787-15285719
Length = 524
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +3
Query: 234 RAFQRD--LHSLRRLSQSLPWVT-SRVFLQSAVCRMMAGAAPRR---TQQLLDGSLRPRF 395
R+ RD L +LR W+T + VF S + RM+ G APR+ +++ ++ L
Sbjct: 199 RSEHRDEFLDALRTALDQTTWLTVADVFPSSKLARML-GTAPRKALASRKKIEHILEQII 257
Query: 396 NRASIICGKERALEGGGGDGE 458
I +R+ GG GDGE
Sbjct: 258 QERKRI--MDRSSHGGDGDGE 276
>02_05_0444 - 29073740-29073844,29074417-29074725,29077910-29077981,
29078541-29078633,29078825-29078982,29079247-29079415,
29080204-29081241,29081632-29081759,29081926-29081985,
29082033-29083077
Length = 1058
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 199 ASGRVPPRINSCEPFNGTFTL*GGCHRAYRGLHLAYSYNRRCVA*WRVLRRAGHNNCSTG 378
++G PPR E + T G C + GLH RR WR +RR+ + S+
Sbjct: 936 STGERPPRRLDLEASSTTT---GACLSSAHGLHRLLFRRRRSAPHWRAIRRSQRPSSSSA 992
Query: 379 VS 384
+
Sbjct: 993 AA 994
>04_01_0373 - 4913283-4913669
Length = 128
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 417 GKERALEGGGGDGERAVALYMACKHLPAAVLAAPG 521
G + + EGGGG+ E AV + MA + AAV+ PG
Sbjct: 30 GGDGSGEGGGGEVEVAVVVQMATER--AAVIGDPG 62
>03_04_0180 + 18173005-18173976,18174066-18174170
Length = 358
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +3
Query: 369 LDGSLRPRFNRASIICGKERALEGGGGDGER--AVALYMACKHLP 497
LDGS RA + LE GG G++ A ALY C P
Sbjct: 165 LDGSAAAAIGRAGAVPVLVSLLESGGARGKKDAATALYALCSGAP 209
>01_03_0152 + 13248027-13248419
Length = 130
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 438 GGGGDGERAVALYMACKHLPAAVLAAPGERAGMLAQAAATLQ 563
G GGDG+ A ++ + L + +R G+ AQA A Q
Sbjct: 76 GSGGDGDAAHMAWVTARPLGGEAKTSARQRPGVSAQATARRQ 117
>11_01_0338 + 2522698-2523213
Length = 171
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 417 GKERALEGGGGDGERAVALYMACKHLP--AAVLAAPGERAGMLAQAA 551
GK R GG G G +VA+ A + +P AA+ P A +A++A
Sbjct: 52 GKRRRKRGGSGSG--SVAVRSAARPIPETAALTLVPSSSAAAMAKSA 96
>09_01_0084 + 1202545-1202755,1202797-1203488
Length = 300
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 420 KERALEGGGGDGERAVALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIGHRS 581
+E AL+G + + A+ +AC+ V GE +A+AA K+ R+
Sbjct: 183 REAALDGEVAEYQSTYAMKLACEKTKDGVAETAGEEMCKMARAARRADKLRWRA 236
>07_03_1086 + 23858419-23859423,23859527-23859610
Length = 362
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +3
Query: 315 SAVCRMMAGAAPRRTQQLLDGSLRPRFNRASIICGKERALEGGGGDGER--AVALYMAC 485
S R A A R QL DGS RA I LE GG G++ A ALY C
Sbjct: 160 SPAARENAACALLRLSQL-DGSAAASIGRAGAIPLLVSLLETGGARGKKDAATALYALC 217
>06_01_0805 +
6043248-6043551,6043654-6043755,6044858-6044964,
6045687-6045824,6046340-6046651
Length = 320
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 176 GRVGGHLRPQVESRPASTAASLSTGPSLSEEAVTELTVGYISRILTIGG 322
G+ G VES T TGPS +E A+ L G +++L GG
Sbjct: 115 GKSVGETTKMVESLSRDTWQHFKTGPSFTEAAMGRLAQG--TKVLAEGG 161
>05_06_0278 + 26894802-26895362
Length = 186
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +2
Query: 122 TDDANAGVVLR--LDVRGTRGRVGGHLRPQVESRPASTAASLSTGPS 256
TDD A LDV G GR GG P +RP + A + G S
Sbjct: 54 TDDGEAVAAASPGLDVPGQLGRSGGAPPPPQSNRPVTPLAGVDGGVS 100
>03_01_0065 +
529200-529438,529770-529929,530217-530299,530398-530488,
530585-530680,531107-531220,531325-531408,531493-531648,
531755-531829,532172-532278,532361-532544,532970-533158,
533372-533452,533794-533925,534302-534355,534484-534809,
534925-535030,535491-535640,535763-535909
Length = 857
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 408 IICGKERALEG-GGGDGERAVALYMACKHLPAAVLAAPGERAGML 539
++C ER+L G GGG + Y+ + LP+ L P E G +
Sbjct: 289 VVC--ERSLSGSGGGPSAASAQQYVRAEMLPSGYLVRPCEGGGSI 331
>02_04_0598 + 24216556-24216636,24217871-24217956,24218083-24218251
Length = 111
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 180 VWEATSGLRSSPAPHQQLRAFQRDLHSLRRLSQSLPWVTSRVFLQS 317
++EA G S+P Q Q LH+ + Q L W T+ +FL+S
Sbjct: 17 IYEAEVG--SAPKREDQAYQHQFILHAALDVVQDLAWATNTMFLKS 60
>01_07_0197 +
41912207-41912652,41913226-41913800,41913828-41915748,
41915836-41916049,41916143-41916394,41916469-41916528,
41916646-41916776,41916898-41917012,41917084-41917239
Length = 1289
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 426 RALEGGGGDGE-RAVALYMACKHLPAAVLAAPGERAGMLAQAAATLQKI 569
R EGGGGDGE A A+ + +LP +V + A AAA + +
Sbjct: 100 RGREGGGGDGEVEARAVVLFDVYLPVSVWSGWQFPRSRAAAAAAVFKHV 148
>06_03_1083 + 27478595-27478996
Length = 133
Score = 25.4 bits (53), Expect(2) = 8.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 435 EGGGGDGERAVALYMACKHLPAAVL 509
+GGGG GER V A +H A L
Sbjct: 71 DGGGGGGERFVVRVEALRHPAFAAL 95
Score = 20.6 bits (41), Expect(2) = 8.6
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3
Query: 423 ERALEGGGGDG 455
+RA GGGGDG
Sbjct: 43 DRAGGGGGGDG 53
>11_01_0442 -
3369827-3370168,3370608-3372616,3372953-3373277,
3373386-3373415
Length = 901
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 91 NESASRAPARSQTLRIVSDVLSTDRSSRHC 2
NE+ A A+S ++V + +S D S++HC
Sbjct: 36 NETQGTATAKSLNEKLVLETVSDDSSTQHC 65
>09_06_0020 -
20267190-20267612,20269086-20269495,20269573-20269747,
20270833-20271066,20271164-20271265,20271354-20272091,
20272204-20272321,20272417-20272667,20272768-20272932
Length = 871
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 438 GGGGDGERAVALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIG 572
GGGGDGE V M +H + APGE G++ A +++ G
Sbjct: 643 GGGGDGEDKVR--MMARH----SVGAPGEPPGVVLSATTSVRLPG 681
>05_06_0124 - 25822176-25822633,25822738-25825420
Length = 1046
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 70 VPDWRTRWLITAAGNRLN 123
V D R W+I+AAGNRLN
Sbjct: 388 VCDNRRLWIISAAGNRLN 405
>04_04_0754 +
27803143-27803517,27805441-27806832,27806910-27807164,
27807246-27807368,27807643-27808119,27808217-27808603
Length = 1002
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +3
Query: 387 PRFNRASIICGKERALEGGGGDGERAVALYMACKHLPAAVLAAPGER----AGMLAQAAA 554
PR R++ + G+ GGGGDG+ A A + AV G AG + +A
Sbjct: 39 PRRPRSAAVAGEGGEGGGGGGDGDLEAAAVGAEEEEKVAVFEVSGMTCAACAGSVEKAVK 98
Query: 555 TLQKI 569
LQ I
Sbjct: 99 RLQGI 103
>03_04_0140 +
17638335-17638583,17638843-17639061,17639206-17639443,
17640614-17640809,17640888-17640942,17641495-17641645,
17642501-17642809,17642950-17643215,17643311-17644237,
17644386-17644712
Length = 978
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = +1
Query: 190 PPPASGRVPPRINS--CEPFNGTFT 258
PPP GR+PPR S C NG T
Sbjct: 61 PPPVVGRMPPRTLSVRCAASNGRIT 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,683,240
Number of Sequences: 37544
Number of extensions: 378851
Number of successful extensions: 1919
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1916
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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