Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12c22
         (603 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U38238-1|AAA97864.1| 1113|Drosophila melanogaster HLH106 protein.     163   2e-40
BT010285-1|AAQ23603.1| 1113|Drosophila melanogaster LP12374p pro...   163   2e-40
AE014296-3210|AAN11632.1| 1113|Drosophila melanogaster CG8522-PC...   163   2e-40
AE014296-3209|AAN11631.1| 1113|Drosophila melanogaster CG8522-PB...   163   2e-40
AE014296-3208|AAF49115.1| 1113|Drosophila melanogaster CG8522-PA...   163   2e-40

>U38238-1|AAA97864.1| 1113|Drosophila melanogaster HLH106 protein.
          Length = 1113

 Score =  163 bits (395), Expect = 2e-40
 Identities = 85/188 (45%), Positives = 117/188 (62%), Gaps = 6/188 (3%)
 Frame = +3

Query: 54   VCDLAGARLADSLAYYCCRKPTQLMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----P 221
            +CD +   L + L          + +L Q+L CDW+LE R  +WE              P
Sbjct: 911  LCDESSVELQECLTVNRITDAKGIKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVP 970

Query: 222  HQQLRAFQRDLHSLRRLSQSLPWVTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNR 401
             + L  FQ DL+SLR + +++P   SR++L  AVCR+MAGA+P  TQQLLD SLR R   
Sbjct: 971  GEVLEKFQTDLNSLRNIVENIPNAQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAH 1030

Query: 402  ASIICG-KERALEG-GGGDGERAVALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIGH 575
            +SI CG K+R  +   GG+ ERA A+Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G 
Sbjct: 1031 SSIFCGSKDRRQQNFVGGERERASAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVGD 1090

Query: 576  RSXLPHCY 599
            +  L  CY
Sbjct: 1091 KRKLKECY 1098


>BT010285-1|AAQ23603.1| 1113|Drosophila melanogaster LP12374p protein.
          Length = 1113

 Score =  163 bits (395), Expect = 2e-40
 Identities = 85/188 (45%), Positives = 117/188 (62%), Gaps = 6/188 (3%)
 Frame = +3

Query: 54   VCDLAGARLADSLAYYCCRKPTQLMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----P 221
            +CD +   L + L          + +L Q+L CDW+LE R  +WE              P
Sbjct: 911  LCDESSVELQECLTVNRITDAKGIKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVP 970

Query: 222  HQQLRAFQRDLHSLRRLSQSLPWVTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNR 401
             + L  FQ DL+SLR + +++P   SR++L  AVCR+MAGA+P  TQQLLD SLR R   
Sbjct: 971  GEVLEKFQTDLNSLRNIVENIPNAQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAH 1030

Query: 402  ASIICG-KERALEG-GGGDGERAVALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIGH 575
            +SI CG K+R  +   GG+ ERA A+Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G 
Sbjct: 1031 SSIFCGSKDRRQQNFVGGERERASAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVGD 1090

Query: 576  RSXLPHCY 599
            +  L  CY
Sbjct: 1091 KRKLKECY 1098


>AE014296-3210|AAN11632.1| 1113|Drosophila melanogaster CG8522-PC,
            isoform C protein.
          Length = 1113

 Score =  163 bits (395), Expect = 2e-40
 Identities = 85/188 (45%), Positives = 117/188 (62%), Gaps = 6/188 (3%)
 Frame = +3

Query: 54   VCDLAGARLADSLAYYCCRKPTQLMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----P 221
            +CD +   L + L          + +L Q+L CDW+LE R  +WE              P
Sbjct: 911  LCDESSVELQECLTVNRITDAKGIKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVP 970

Query: 222  HQQLRAFQRDLHSLRRLSQSLPWVTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNR 401
             + L  FQ DL+SLR + +++P   SR++L  AVCR+MAGA+P  TQQLLD SLR R   
Sbjct: 971  GEVLEKFQTDLNSLRNIVENIPNAQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAH 1030

Query: 402  ASIICG-KERALEG-GGGDGERAVALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIGH 575
            +SI CG K+R  +   GG+ ERA A+Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G 
Sbjct: 1031 SSIFCGSKDRRQQNFVGGERERASAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVGD 1090

Query: 576  RSXLPHCY 599
            +  L  CY
Sbjct: 1091 KRKLKECY 1098


>AE014296-3209|AAN11631.1| 1113|Drosophila melanogaster CG8522-PB,
            isoform B protein.
          Length = 1113

 Score =  163 bits (395), Expect = 2e-40
 Identities = 85/188 (45%), Positives = 117/188 (62%), Gaps = 6/188 (3%)
 Frame = +3

Query: 54   VCDLAGARLADSLAYYCCRKPTQLMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----P 221
            +CD +   L + L          + +L Q+L CDW+LE R  +WE              P
Sbjct: 911  LCDESSVELQECLTVNRITDAKGIKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVP 970

Query: 222  HQQLRAFQRDLHSLRRLSQSLPWVTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNR 401
             + L  FQ DL+SLR + +++P   SR++L  AVCR+MAGA+P  TQQLLD SLR R   
Sbjct: 971  GEVLEKFQTDLNSLRNIVENIPNAQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAH 1030

Query: 402  ASIICG-KERALEG-GGGDGERAVALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIGH 575
            +SI CG K+R  +   GG+ ERA A+Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G 
Sbjct: 1031 SSIFCGSKDRRQQNFVGGERERASAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVGD 1090

Query: 576  RSXLPHCY 599
            +  L  CY
Sbjct: 1091 KRKLKECY 1098


>AE014296-3208|AAF49115.1| 1113|Drosophila melanogaster CG8522-PA,
            isoform A protein.
          Length = 1113

 Score =  163 bits (395), Expect = 2e-40
 Identities = 85/188 (45%), Positives = 117/188 (62%), Gaps = 6/188 (3%)
 Frame = +3

Query: 54   VCDLAGARLADSLAYYCCRKPTQLMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----P 221
            +CD +   L + L          + +L Q+L CDW+LE R  +WE              P
Sbjct: 911  LCDESSVELQECLTVNRITDAKGIKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVP 970

Query: 222  HQQLRAFQRDLHSLRRLSQSLPWVTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNR 401
             + L  FQ DL+SLR + +++P   SR++L  AVCR+MAGA+P  TQQLLD SLR R   
Sbjct: 971  GEVLEKFQTDLNSLRNIVENIPNAQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAH 1030

Query: 402  ASIICG-KERALEG-GGGDGERAVALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIGH 575
            +SI CG K+R  +   GG+ ERA A+Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G 
Sbjct: 1031 SSIFCGSKDRRQQNFVGGERERASAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVGD 1090

Query: 576  RSXLPHCY 599
            +  L  CY
Sbjct: 1091 KRKLKECY 1098


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,449,005
Number of Sequences: 53049
Number of extensions: 548332
Number of successful extensions: 2347
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2337
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)