Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12c20
         (429 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          23   1.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   5.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   5.8  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   7.7  

>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 37  CKITCVKCKIRLN*HYRNHRNSIK*KAQFARN 132
           C  TC KCKI  N   +  R ++K K   A++
Sbjct: 2   CYCTCEKCKITAN-RQQVMRQNMKLKRHLAQD 32


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 115 PFILLNFYDYDNVNLVLFYILHK 47
           PF+L N  ++  +    ++ LHK
Sbjct: 241 PFMLSNSLNFPQIRGEFYFFLHK 263


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 115 PFILLNFYDYDNVNLVLFYILHK 47
           PF+L N  ++  +    ++ LHK
Sbjct: 241 PFMLSNSLNFPQIRGEFYFFLHK 263


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 169 VFESFRDLVFGGHFLQTEPFILLN 98
           ++E +++    G +    PF+LLN
Sbjct: 63  IYEKYKNEPMVGLYATRSPFLLLN 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,098
Number of Sequences: 438
Number of extensions: 2586
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)