Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12c12
         (611 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81095-4|CAB03160.1|  262|Caenorhabditis elegans Hypothetical pr...    45   5e-05
Z81089-7|CAB03139.1|  262|Caenorhabditis elegans Hypothetical pr...    45   5e-05
Z81516-4|CAB04205.1|  208|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ...    28   4.6  
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.      28   4.6  
Z81585-2|CAB04682.2|  303|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z81095-4|CAB03160.1|  262|Caenorhabditis elegans Hypothetical
           protein F59F4.4 protein.
          Length = 262

 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = +1

Query: 319 RVMKHMNKLLGIEWHIRNGEYLSGDYGAVILNNHQCIFDALGMFNAWEIAGKMCVIM-KK 495
           ++ + M   +G+ + +RN E L      +I+ NHQ   D LGM  AW +    CV+M K 
Sbjct: 61  KIFQAMTWPMGVRFELRNSEILHDKKPYIIIANHQSALDVLGMSFAWPVD---CVVMLKS 117

Query: 496 ELFYAGTFXXXXXXXXXXXXDRKNAKNAHKTIQDT 600
            L Y   F            +R + + A KT+  T
Sbjct: 118 SLKYLPGFNLCAYLCDSVYINRFSKEKALKTVDTT 152


>Z81089-7|CAB03139.1|  262|Caenorhabditis elegans Hypothetical
           protein F59F4.4 protein.
          Length = 262

 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = +1

Query: 319 RVMKHMNKLLGIEWHIRNGEYLSGDYGAVILNNHQCIFDALGMFNAWEIAGKMCVIM-KK 495
           ++ + M   +G+ + +RN E L      +I+ NHQ   D LGM  AW +    CV+M K 
Sbjct: 61  KIFQAMTWPMGVRFELRNSEILHDKKPYIIIANHQSALDVLGMSFAWPVD---CVVMLKS 117

Query: 496 ELFYAGTFXXXXXXXXXXXXDRKNAKNAHKTIQDT 600
            L Y   F            +R + + A KT+  T
Sbjct: 118 SLKYLPGFNLCAYLCDSVYINRFSKEKALKTVDTT 152


>Z81516-4|CAB04205.1|  208|Caenorhabditis elegans Hypothetical
           protein F26H9.6 protein.
          Length = 208

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 19/73 (26%), Positives = 26/73 (35%)
 Frame = +1

Query: 376 EYLSGDYGAVILNNHQCIFDALGMFNAWEIAGKMCVIMKKELFYAGTFXXXXXXXXXXXX 555
           EY     GA  L    C+ DA   F  W+ AG+        ++Y G              
Sbjct: 46  EYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQE 105

Query: 556 DRKNAKNAHKTIQ 594
             + AKN  K +Q
Sbjct: 106 SFQKAKNWVKELQ 118


>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 292 DVKNGTIYARVMKHMNKLLGIEW 360
           DV N  +Y+R + H   +LGI W
Sbjct: 707 DVANAKLYSRFVNHTGGILGIAW 729


>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 292 DVKNGTIYARVMKHMNKLLGIEW 360
           DV N  +Y+R + H   +LGI W
Sbjct: 707 DVANAKLYSRFVNHTGGILGIAW 729


>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
          Length = 1057

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 292 DVKNGTIYARVMKHMNKLLGIEW 360
           DV N  +Y+R + H   +LGI W
Sbjct: 707 DVANAKLYSRFVNHTGGILGIAW 729


>Z81585-2|CAB04682.2|  303|Caenorhabditis elegans Hypothetical
           protein T05E12.2 protein.
          Length = 303

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 591 DGFMSIFCVFSIYVNPAAQVSCYSEGTGVK*FFLHYYTHF 472
           D F+ +FC FS+ + P    +C + G  +   FL ++T +
Sbjct: 146 DVFLFVFCEFSLQIRP----NCAAFGCSINACFLKFWTSY 181


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,956,397
Number of Sequences: 27780
Number of extensions: 291676
Number of successful extensions: 647
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)