Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12c07
         (487 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060765-1|AAL28313.1|  108|Drosophila melanogaster GH22881p pro...    62   5e-10
AE014134-1175|AAN10602.2|  108|Drosophila melanogaster CG17377-P...    62   5e-10
AE014134-1174|AAN10601.1|  287|Drosophila melanogaster CG17377-P...    62   5e-10
AE014134-1173|AAF52442.3|  173|Drosophila melanogaster CG17377-P...    62   5e-10

>AY060765-1|AAL28313.1|  108|Drosophila melanogaster GH22881p
           protein.
          Length = 108

 Score = 61.7 bits (143), Expect = 5e-10
 Identities = 27/51 (52%), Positives = 31/51 (60%)
 Frame = +3

Query: 327 RTSKSRELRGSILYTDCFCLRRNGLQYDCRXSGCQGSQLCXTLPRPLCEPA 479
           R  +SRELR  I+YT C C++RNGLQ  C  S CQG   C   P P C PA
Sbjct: 11  RGCRSRELRCGIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGPA 61


>AE014134-1175|AAN10602.2|  108|Drosophila melanogaster CG17377-PB,
           isoform B protein.
          Length = 108

 Score = 61.7 bits (143), Expect = 5e-10
 Identities = 27/51 (52%), Positives = 31/51 (60%)
 Frame = +3

Query: 327 RTSKSRELRGSILYTDCFCLRRNGLQYDCRXSGCQGSQLCXTLPRPLCEPA 479
           R  +SRELR  I+YT C C++RNGLQ  C  S CQG   C   P P C PA
Sbjct: 11  RGCRSRELRCGIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGPA 61


>AE014134-1174|AAN10601.1|  287|Drosophila melanogaster CG17377-PC,
           isoform C protein.
          Length = 287

 Score = 61.7 bits (143), Expect = 5e-10
 Identities = 27/51 (52%), Positives = 31/51 (60%)
 Frame = +3

Query: 327 RTSKSRELRGSILYTDCFCLRRNGLQYDCRXSGCQGSQLCXTLPRPLCEPA 479
           R  +SRELR  I+YT C C++RNGLQ  C  S CQG   C   P P C PA
Sbjct: 11  RGCRSRELRCGIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGPA 61


>AE014134-1173|AAF52442.3|  173|Drosophila melanogaster CG17377-PA,
           isoform A protein.
          Length = 173

 Score = 61.7 bits (143), Expect = 5e-10
 Identities = 27/51 (52%), Positives = 31/51 (60%)
 Frame = +3

Query: 327 RTSKSRELRGSILYTDCFCLRRNGLQYDCRXSGCQGSQLCXTLPRPLCEPA 479
           R  +SRELR  I+YT C C++RNGLQ  C  S CQG   C   P P C PA
Sbjct: 11  RGCRSRELRCGIMYTTCDCVKRNGLQDKCPRSACQGRPACLCFPFPTCGPA 61


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,710,993
Number of Sequences: 53049
Number of extensions: 264950
Number of successful extensions: 518
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)