Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12c06
(685 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0468 + 6032467-6033670,6033858-6033964,6034122-6034178 112 3e-25
04_01_0630 - 8354628-8355803,8355837-8355926 102 3e-22
02_05_0338 - 28084169-28084366,28084414-28085225,28085565-280855... 93 2e-19
03_02_0868 + 11937652-11937757,11938097-11938671 82 5e-16
10_05_0068 + 8774712-8774787,8774812-8774852,8774895-8775743,877... 80 2e-15
09_02_0336 - 7397745-7398308,7398813-7400723 71 9e-13
04_03_0631 - 18190195-18190686,18190866-18191066 48 7e-06
07_03_0346 - 17010472-17010843 39 0.004
12_01_0090 + 717524-719080 31 0.85
11_01_0089 + 670597-672210 31 0.85
04_04_1233 + 31966790-31967095,31967212-31967289,31967335-319673... 30 2.0
09_02_0094 + 4196729-4197571 28 7.9
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 28 7.9
01_03_0194 + 13645418-13645790,13645879-13647653 28 7.9
>04_01_0468 + 6032467-6033670,6033858-6033964,6034122-6034178
Length = 455
Score = 112 bits (269), Expect = 3e-25
Identities = 76/211 (36%), Positives = 109/211 (51%), Gaps = 12/211 (5%)
Frame = +3
Query: 3 GLKQAPFTWNKTFTQAMFDLGFKTIKTDRCVFIN--EDKSIIIGLFVDDGLVIGXXXXXX 176
GLKQ+P W K F M GFK + D CV+I I + L+VDD L+
Sbjct: 170 GLKQSPRQWYKRFDSFMLSHGFKWSEFDSCVYIKFVNGSPIYLLLYVDDMLIAAKSKEQI 229
Query: 177 XXXXXXXXXXFQMKKNENPSTYLGMEI-KNSKEGII-LTQRSYINDVLEKYNMKNAKPCD 350
F MK LGMEI ++ G++ L+Q+SYI VLE +NM +AKP
Sbjct: 230 TTLKKQLSSEFDMKDLGAAKKILGMEITRDINFGLLFLSQQSYIKKVLEHFNMHDAKPIS 289
Query: 351 TPASSDSK--SIQ--ETAQEKEY----PYREAVGSLLYLSTRTRPDIAQAVNLVSRKVEN 506
TP ++ K ++Q T ++ Y PY AVGSL+Y +RPD++ A++LVSR + N
Sbjct: 290 TPIAAHFKLSALQCASTDEDVGYMSRVPYSSAVGSLMYAMICSRPDLSHAMSLVSRYMAN 349
Query: 507 PTREDVTKLKKIFKYLVGTKHKGILFNETNR 599
P +E ++ F+YL GT F T++
Sbjct: 350 PGKEHWKAVQWFFRYLRGTTDACSKFGRTDK 380
>04_01_0630 - 8354628-8355803,8355837-8355926
Length = 421
Score = 102 bits (244), Expect = 3e-22
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Frame = +3
Query: 3 GLKQAPFTWNKTFTQAMFDLGFKTIKTDRCVFINEDKS--IIIGLFVDDGLVIGXXXXXX 176
GLKQ+ W ++ + G+ CVFI + + II ++VDD +IG
Sbjct: 35 GLKQSGRMWYNRLSEFLSLKGYTKNDDCPCVFIKKSPTGFCIISVYVDDLNIIGNTQDIN 94
Query: 177 XXXXXXXXXXFQMKKNENPSTYLGMEIKNSKEGIILTQRSYINDVLEKYNMKNAKPCDTP 356
F+MK LG+++++ GI++ Q +Y +LEK+NM + P TP
Sbjct: 95 EARHHLKTE-FEMKDLGQTKFCLGLQLEHLPSGILVHQSAYAQKMLEKFNMDKSYPSKTP 153
Query: 357 ASSDSKSIQ----------ETAQEKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVEN 506
S ++ E ++PY A+G+L+YL+ TRPDIA +VNL++R
Sbjct: 154 MVVRSLDVEKDPFRPKEDGEDVLGPDFPYLSAIGALMYLANSTRPDIAFSVNLLARYSAA 213
Query: 507 PTREDVTKLKKIFKYLVGTKHKGILFNE 590
PT+ T +K +F+YL GT+ G+ F +
Sbjct: 214 PTKRHWTGVKNVFRYLNGTRDLGLFFKK 241
>02_05_0338 - 28084169-28084366,28084414-28085225,28085565-28085595,
28085638-28086214,28086439-28087145,28087188-28087228,
28087253-28087366,28087517-28088108
Length = 1023
Score = 92.7 bits (220), Expect = 2e-19
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Frame = +3
Query: 24 TWNKTFTQAMFDLGFKTIKTDRCVFINEDKS--IIIGLFVDDGLVIGXXXXXXXXXXXXX 197
TW F + + GF K D+CV+ + +I+ L+VDD L+ G
Sbjct: 675 TWEWVFKKKLRPDGFAVNKADKCVYYRHGRGEGVILCLYVDDILIFGTNLEVINEVKSFL 734
Query: 198 XXXFQMKKNENPSTYLGMEIKNSKEGIILTQRSYINDVLEKYNMKNAKPCDTPASSDSKS 377
F MK L +++ + GI L Q Y+ +L ++ ++KP TP S
Sbjct: 735 SQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP-SLL 793
Query: 378 IQETAQ--EKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTREDVTKLKKIFKY 551
+++ + + Y + +GSL+YL++ TRPDI+ AV+ +SR NP + L+++ +Y
Sbjct: 794 LRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRY 853
Query: 552 LVGTKHKGI 578
L GT G+
Sbjct: 854 LKGTVELGL 862
>03_02_0868 + 11937652-11937757,11938097-11938671
Length = 226
Score = 81.8 bits (193), Expect = 5e-16
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Frame = +3
Query: 3 GLKQAPFTWNKTFTQAMFDLGFKTIKTDRCVFINED--KSIIIGLFVDDGLVIGXXXXXX 176
G K W F + + GF + D+CV+ + +I+ L+VDD L+ G
Sbjct: 18 GCKPVGCKW--VFKKKLRPDGFAVNEADKCVYYLHGGVEGVILCLYVDDILIFGTNLEMI 75
Query: 177 XXXXXXXXXXFQMKKNENPSTYLGMEIKNSKEGIILTQRSYINDVLEKYNMKNAKPCDTP 356
F MK L +++ + GI L Q Y+ +L + ++KP TP
Sbjct: 76 NEVKSFLYQNFDMKDLGVADVILNIKLIRCENGITLLQSHYVEKILNHFGYIDSKPSPTP 135
Query: 357 ASSDSKSIQETAQ--EKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTREDVTK 530
S +++ + + Y + +GSL+YL++ TRPDI+ AV+ +SR NP +
Sbjct: 136 YDP-SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRA 194
Query: 531 LKKIFKYLVGT 563
L+++ +YL GT
Sbjct: 195 LERVMRYLKGT 205
>10_05_0068 +
8774712-8774787,8774812-8774852,8774895-8775743,
8776210-8776582,8776814-8777484
Length = 669
Score = 79.8 bits (188), Expect = 2e-15
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 4/175 (2%)
Frame = +3
Query: 66 FKTIKTDRCVFINED--KSIIIGLFVDDGLVIGXXXXXXXXXXXXXXXXFQMKKNENPST 239
F + D+CV+ + +I+ L+VDD L+ G F MK
Sbjct: 448 FAVNEADKCVYYRHGGGEGVILCLYVDDVLIFGTNLEVINEVKSFLSQNFDMKDLGVVDV 507
Query: 240 YLGMEIKNSKEGIILTQRSYINDVLEKYNMKNAKPCDTPASSDSKSIQETAQ--EKEYPY 413
L +++ + GI L Q Y+ +L ++ ++KP TP S +++ + + Y
Sbjct: 508 ILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP-SLLLRKNKRIARNQLEY 566
Query: 414 REAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTREDVTKLKKIFKYLVGTKHKGI 578
+ +GSL+YL++ TR DI+ AV+ +SR NP + L+++ +YL GT G+
Sbjct: 567 SQIIGSLMYLASATRLDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTMELGL 621
>09_02_0336 - 7397745-7398308,7398813-7400723
Length = 824
Score = 70.9 bits (166), Expect = 9e-13
Identities = 48/130 (36%), Positives = 63/130 (48%), Gaps = 10/130 (7%)
Frame = +3
Query: 207 FQMKKNENPSTYLGMEIKN--SKEGIILTQRSYINDVLEKYNMKNAKPCDTP-------- 356
F MK S LG+EI +K + L+Q++YI VL+K+NM P
Sbjct: 647 FDMKDLGEASYVLGIEIHRDRTKYALGLSQKTYIEKVLKKFNMYRCSTTPAPIMKGEKYG 706
Query: 357 ASSDSKSIQETAQEKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTREDVTKLK 536
AS ++ E + K PY AVGSL Y TRPD+A L+ R NP E +K
Sbjct: 707 ASQCPRNQYELNEMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGRFQSNPGLEHWKLIK 766
Query: 537 KIFKYLVGTK 566
K+ YL GTK
Sbjct: 767 KVLHYLQGTK 776
>04_03_0631 - 18190195-18190686,18190866-18191066
Length = 230
Score = 48.0 bits (109), Expect = 7e-06
Identities = 16/39 (41%), Positives = 30/39 (76%)
Frame = +3
Query: 240 YLGMEIKNSKEGIILTQRSYINDVLEKYNMKNAKPCDTP 356
+LG+++K ++EG ++Q Y+ D+L+K+ M++AKP TP
Sbjct: 10 FLGLQVKQAQEGTFISQTKYVKDILKKFGMEDAKPIKTP 48
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 617 YSDSDYAGDPLTRRSTSGS 673
YSDSDYAG + R+ST+G+
Sbjct: 76 YSDSDYAGCKVDRKSTTGT 94
>07_03_0346 - 17010472-17010843
Length = 123
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +2
Query: 596 PIESIDAYSDSDYAGDPLTRRSTSG 670
P++S+ AYSD+D+AG P +RRSTSG
Sbjct: 91 PVKSLTAYSDADWAGCPDSRRSTSG 115
>12_01_0090 + 717524-719080
Length = 518
Score = 31.1 bits (67), Expect = 0.85
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 213 MKKNENPSTYLGMEIKNSKEGIILTQRSYINDVLEKYNM 329
MK NP T+LG+ S G++ R Y N ++E Y +
Sbjct: 367 MKIEPNPVTFLGVLTACSHGGLVNEGRKYFNSMIEDYRI 405
>11_01_0089 + 670597-672210
Length = 537
Score = 31.1 bits (67), Expect = 0.85
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 213 MKKNENPSTYLGMEIKNSKEGIILTQRSYINDVLEKYNM 329
MK NP T+LG+ S G++ R Y N ++E Y +
Sbjct: 439 MKIEPNPVTFLGVLTACSHGGLVNEGRKYFNSMIEDYRI 477
>04_04_1233 +
31966790-31967095,31967212-31967289,31967335-31967355,
31967390-31967557
Length = 190
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = -1
Query: 661 ASSRQWVSSIIRVAVSID-----ALYRFVSLNKMPLCLVPTKYL 545
ASSRQ + +++ VS+D +LY L K LCLVP L
Sbjct: 142 ASSRQPAAEVLQETVSVDNNNDKSLYECNELRKKGLCLVPLSML 185
>09_02_0094 + 4196729-4197571
Length = 280
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 106 SFMKTHRSVLIVLNPKSNIAWVKVL 32
+F H V++V +PKS+ W+K L
Sbjct: 11 NFKPRHDDVILVTHPKSSTTWLKAL 35
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +3
Query: 210 QMKKNENPSTYLGMEIKNSKEGIILTQRSYINDVLEKYNMKNAKPCDTPASSDSKSIQET 389
Q+ E P+ YL ME+ N G R V N+ N +PCD SI++T
Sbjct: 555 QVGSKERPN-YLPMELCNIVPGQRYKNRLSPTQVSNLINITNDRPCDR-----ESSIRQT 608
Query: 390 AQEKEY 407
+Y
Sbjct: 609 VSSNQY 614
>01_03_0194 + 13645418-13645790,13645879-13647653
Length = 715
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 342 VWHFSCCIFPVRHL 301
VWH + CIF +RH+
Sbjct: 539 VWHIATCIFEIRHM 552
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,579,508
Number of Sequences: 37544
Number of extensions: 356954
Number of successful extensions: 846
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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