Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12c06
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...   109   1e-25
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    28   0.24 
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    28   0.24 
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    28   0.24 
AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione S-tran...    27   0.73 
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    25   2.9  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    24   3.9  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   6.8  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   6.8  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   6.8  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
            protein.
          Length = 942

 Score =  109 bits (261), Expect = 1e-25
 Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
 Frame = +3

Query: 3    GLKQAPFTWNKTFTQAMFDLGFKTIKTDRCVFINE--DKSIIIGLFVDDGLVIGXXXXXX 176
            GLKQA   WN+T T+ +  LGF + + D C+F+    D+   I L+VDD LV        
Sbjct: 579  GLKQAGRVWNQTITEVLRSLGFHSSEADPCLFVKNKRDRWSFILLYVDDMLVACSEDREY 638

Query: 177  XXXXXXXXXXFQMKKNENPSTYLGMEIKNSKEG-IILTQRSYINDVLEKYNMKNAKPCDT 353
                      F++    +   YLG+ I+  + G  +L Q SYI  + +++  ++A+P   
Sbjct: 639  EDIENTLKRHFKITTLGDVRNYLGIRIERGQNGEYLLDQASYIRRIAKRFGQEDARPSRI 698

Query: 354  PASSDSKSIQETAQEKEYP----YREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTRED 521
            P       IQ+  +EK  P    ++  VG+LLY++  TRPDIA + +++ RKV NP + D
Sbjct: 699  PMDPGYPKIQQK-EEKPMPRNDDFQSLVGALLYVAVNTRPDIAISASILGRKVSNPCQAD 757

Query: 522  VTKLKKIFKYLVGT 563
             T+ K+  +YL  T
Sbjct: 758  WTEAKRTLRYLNST 771



 Score = 28.7 bits (61), Expect = 0.18
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 608 IDAYSDSDYAGDPLTRRSTSGSV 676
           ++AY D+D+AGD   R+S SG +
Sbjct: 784 LEAYVDADWAGDHQDRKSNSGFI 806


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +3

Query: 363 SDSKSIQETAQEKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTRE 518
           SD   + ET      P+  AVG +LY      P    A  +++R++   + E
Sbjct: 342 SDKLEVDETDHRTNVPHIYAVGDVLYRKPELTPVAIHAGRIIARRLFGGSEE 393


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +3

Query: 363 SDSKSIQETAQEKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTRE 518
           SD   + ET      P+  AVG +LY      P    A  +++R++   + E
Sbjct: 318 SDKLEVDETDHRTNVPHIYAVGDVLYRKPELTPVAIHAGRIIARRLFGGSEE 369


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +3

Query: 363 SDSKSIQETAQEKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTRE 518
           SD   + ET      P+  AVG +LY      P    A  +++R++   + E
Sbjct: 315 SDKLEVDETDHRTNVPHIYAVGDVLYRKPELTPVAIHAGRIIARRLFGGSEE 366


>AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione
           S-transferase D3 protein.
          Length = 210

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +3

Query: 384 ETAQEKEYPYREAVGSLLYLSTRTR-PDIAQAVNLVSRKVENPTREDVTKLKKIFKYL 554
           +T   K+   R  V   L+    T    I   ++LV +K E PT E + KLKK    L
Sbjct: 79  DTLYPKDPKVRSVVNQRLFFDIGTLYKQIIDIIHLVVKK-EQPTDEQMEKLKKAMDLL 135


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 396 EKEYPYREAVGSLLYLSTRTRPDI 467
           E +YP R +  ++ Y   + RPDI
Sbjct: 108 EGQYPVRRSFDTMTYYRQQVRPDI 131


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +3

Query: 9   KQAPFTWNKTFTQAMFDLGFKTIKTDRCVFINEDKSI---IIGLFVDD 143
           K+ PFTWN+  +       F  +    CV +    S+    +G F+D+
Sbjct: 176 KEPPFTWNEIGSYLPTSPLFGDVTNGSCVIVASAGSLKRSQLGSFIDE 223


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 415 GKQWEVYCTCLPEP 456
           GK+ E+Y  C PEP
Sbjct: 187 GKRNEIYYNCCPEP 200


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 415 GKQWEVYCTCLPEP 456
           GK+ E+Y  C PEP
Sbjct: 219 GKRNEIYYNCCPEP 232


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 438 YLSTRTRPDIAQAVNLVSRKVENPTREDVTKLKK 539
           YL+ R R +IA A+ L  R+++   +    KLKK
Sbjct: 162 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 195


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,930
Number of Sequences: 2352
Number of extensions: 14607
Number of successful extensions: 29
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)