Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12c06
(685 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical p... 102 4e-22
X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical p... 102 4e-22
X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein ( Dros... 102 4e-22
X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprot... 102 4e-22
BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p pro... 102 4e-22
AF492763-1|AAM11672.1| 415|Drosophila melanogaster polyprotein ... 98 1e-20
AY119276-1|AAM51136.1| 714|Drosophila melanogaster SD26211p pro... 79 7e-15
X07656-2|CAA30503.1| 982|Drosophila melanogaster protein ( Dros... 78 1e-14
AJ439431-1|CAD28424.1| 76|Drosophila melanogaster reverse tran... 31 1.1
AE014297-2383|AAF55448.2| 1534|Drosophila melanogaster CG14322-P... 31 1.9
BT011539-1|AAS15675.1| 179|Drosophila melanogaster LP13032p pro... 29 7.8
>X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical
protein protein.
Length = 1017
Score = 102 bits (245), Expect = 4e-22
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 GLKQAPFTWNKTFTQAMFDLGFKTIKTDRCVFI----NEDKSIIIGLFVDDGLVIGXXXX 170
GLKQA W + F QA+ + F DRC++I N +++I + L+VDD ++
Sbjct: 648 GLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMT 707
Query: 171 XXXXXXXXXXXXFQMKKNENPSTYLGMEIKNSKEGIILTQRSYINDVLEKYNMKNAKPCD 350
F+M ++G+ I+ ++ I L+Q +Y+ +L K+NM+N
Sbjct: 708 RMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVS 767
Query: 351 TPASSD-SKSIQETAQEKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTREDVT 527
TP S + + + ++ P R +G L+Y+ TRPD+ AVN++SR E
Sbjct: 768 TPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQ 827
Query: 528 KLKKIFKYLVGTKHKGILFNE 590
LK++ +YL GT ++F +
Sbjct: 828 NLKRVLRYLKGTIDMKLIFKK 848
>X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical
protein protein.
Length = 1409
Score = 102 bits (245), Expect = 4e-22
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 GLKQAPFTWNKTFTQAMFDLGFKTIKTDRCVFI----NEDKSIIIGLFVDDGLVIGXXXX 170
GLKQA W + F QA+ + F DRC++I N +++I + L+VDD ++
Sbjct: 1040 GLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMT 1099
Query: 171 XXXXXXXXXXXXFQMKKNENPSTYLGMEIKNSKEGIILTQRSYINDVLEKYNMKNAKPCD 350
F+M ++G+ I+ ++ I L+Q +Y+ +L K+NM+N
Sbjct: 1100 RMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVS 1159
Query: 351 TPASSD-SKSIQETAQEKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTREDVT 527
TP S + + + ++ P R +G L+Y+ TRPD+ AVN++SR E
Sbjct: 1160 TPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQ 1219
Query: 528 KLKKIFKYLVGTKHKGILFNE 590
LK++ +YL GT ++F +
Sbjct: 1220 NLKRVLRYLKGTIDMKLIFKK 1240
>X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein (
Drosophila melanogastervirus like particle RNA (VLP
H-RNA). ).
Length = 1288
Score = 102 bits (245), Expect = 4e-22
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 GLKQAPFTWNKTFTQAMFDLGFKTIKTDRCVFI----NEDKSIIIGLFVDDGLVIGXXXX 170
GLKQA W + F QA+ + F DRC++I N +++I + L+VDD ++
Sbjct: 1040 GLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMT 1099
Query: 171 XXXXXXXXXXXXFQMKKNENPSTYLGMEIKNSKEGIILTQRSYINDVLEKYNMKNAKPCD 350
F+M ++G+ I+ ++ I L+Q +Y+ +L K+NM+N
Sbjct: 1100 RMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVS 1159
Query: 351 TPASSD-SKSIQETAQEKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTREDVT 527
TP S + + + ++ P R +G L+Y+ TRPD+ AVN++SR E
Sbjct: 1160 TPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQ 1219
Query: 528 KLKKIFKYLVGTKHKGILFNE 590
LK++ +YL GT ++F +
Sbjct: 1220 NLKRVLRYLKGTIDMKLIFKK 1240
>X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprotein
protein.
Length = 1409
Score = 102 bits (245), Expect = 4e-22
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 GLKQAPFTWNKTFTQAMFDLGFKTIKTDRCVFI----NEDKSIIIGLFVDDGLVIGXXXX 170
GLKQA W + F QA+ + F DRC++I N +++I + L+VDD ++
Sbjct: 1040 GLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMT 1099
Query: 171 XXXXXXXXXXXXFQMKKNENPSTYLGMEIKNSKEGIILTQRSYINDVLEKYNMKNAKPCD 350
F+M ++G+ I+ ++ I L+Q +Y+ +L K+NM+N
Sbjct: 1100 RMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVS 1159
Query: 351 TPASSD-SKSIQETAQEKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTREDVT 527
TP S + + + ++ P R +G L+Y+ TRPD+ AVN++SR E
Sbjct: 1160 TPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQ 1219
Query: 528 KLKKIFKYLVGTKHKGILFNE 590
LK++ +YL GT ++F +
Sbjct: 1220 NLKRVLRYLKGTIDMKLIFKK 1240
>BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p protein.
Length = 1409
Score = 102 bits (245), Expect = 4e-22
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 GLKQAPFTWNKTFTQAMFDLGFKTIKTDRCVFI----NEDKSIIIGLFVDDGLVIGXXXX 170
GLKQA W + F QA+ + F DRC++I N +++I + L+VDD ++
Sbjct: 1040 GLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMT 1099
Query: 171 XXXXXXXXXXXXFQMKKNENPSTYLGMEIKNSKEGIILTQRSYINDVLEKYNMKNAKPCD 350
F+M ++G+ I+ ++ I L+Q +Y+ +L K+NM+N
Sbjct: 1100 RMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVS 1159
Query: 351 TPASSD-SKSIQETAQEKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTREDVT 527
TP S + + + ++ P R +G L+Y+ TRPD+ AVN++SR E
Sbjct: 1160 TPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQ 1219
Query: 528 KLKKIFKYLVGTKHKGILFNE 590
LK++ +YL GT ++F +
Sbjct: 1220 NLKRVLRYLKGTIDMKLIFKK 1240
>AF492763-1|AAM11672.1| 415|Drosophila melanogaster polyprotein
protein.
Length = 415
Score = 97.9 bits (233), Expect = 1e-20
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Frame = +3
Query: 3 GLKQAPFTWNKTFTQAMFDLGFKTIKTDRCVFINEDKS--IIIGLFVDDGLVIGXXXXXX 176
GLKQ+ WN + + ++GFK K + C++ + ++ I ++VDD ++I
Sbjct: 57 GLKQSERLWNDALNEVLQNMGFKRSKNEACLYYKKQQNGFSYIAVYVDDLIIISPKESDI 116
Query: 177 XXXXXXXXXXFQMKKNENPSTYLGMEI--KNSKEGIILTQRSYINDVLEKYNMKNAKPCD 350
F MK +LGMEI K I L Q+ YI ++L +Y M++ +
Sbjct: 117 EDIKGSIATKFDMKDGGQLRYFLGMEISRKGQTGPIKLCQKRYIENLLRRYGMQSCRLVG 176
Query: 351 TPASSDSKS---IQETAQEKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTRED 521
TP +S ++ A+ ++ +GSL+YL+ +RPDI +V+ +S++ +P ED
Sbjct: 177 TPFDPGYESGCTNEKCAKVNLTHFQSLIGSLMYLAVVSRPDILHSVSKLSQRNTDPHHED 236
Query: 522 VTKLKKIFKYLVGTKHKGILFNET 593
K + +YL GT + I++ +T
Sbjct: 237 EAAAKHVLRYLCGTINLSIIYMKT 260
>AY119276-1|AAM51136.1| 714|Drosophila melanogaster SD26211p
protein.
Length = 714
Score = 78.6 bits (185), Expect = 7e-15
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 7/194 (3%)
Frame = +3
Query: 3 GLKQAPFTWNKTFTQAMFDLGFKTIKTDRCVFINEDKS--IIIGLFVDDGLVIGXXXXXX 176
GLKQ+ WN + DLGFK + C++ + ++I ++VDD ++
Sbjct: 354 GLKQSGREWNSKLDGVLKDLGFKACNHEPCLYQQSGQGNLMLILVYVDDLILACQSREDM 413
Query: 177 XXXXXXXXXXFQMKKNENPSTYLGMEIKNSKE--GIILTQRSYINDVLEKYNMKNAKPCD 350
F+ +LGME++ + I L YI ++L Y +N +P
Sbjct: 414 EDLKAKISESFECTDKGPLHLFLGMEVQRDGDLGEITLGHSQYIKELLRAYGSENCRPAT 473
Query: 351 TPASSDSKSI--QETAQEKEY-PYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTRED 521
TP + + + E Q+ + Y+ +G L++L TRPDI +V ++++ ++P E
Sbjct: 474 TPLDAGHQVLCAGEQCQKVDAGQYQSTIGELMWLGLTTRPDILHSVAKLAQRNKDPHSEH 533
Query: 522 VTKLKKIFKYLVGT 563
+ +K I +YL T
Sbjct: 534 MVAVKHILRYLAST 547
>X07656-2|CAA30503.1| 982|Drosophila melanogaster protein (
Drosophila melanogasterretrotransposon 1731 sequence. ).
Length = 982
Score = 77.8 bits (183), Expect = 1e-14
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 7/194 (3%)
Frame = +3
Query: 3 GLKQAPFTWNKTFTQAMFDLGFKTIKTDRCVFINEDKS--IIIGLFVDDGLVIGXXXXXX 176
GLKQ+ WN + DLGFK + C++ + ++I ++VDD ++
Sbjct: 666 GLKQSGREWNSKLDGVLKDLGFKACNHEPCLYQQSGQGNLMLILVYVDDLILACQSREDM 725
Query: 177 XXXXXXXXXXFQMKKNENPSTYLGMEIKNSKE--GIILTQRSYINDVLEKYNMKNAKPCD 350
F+ +LGME++ + I L YI ++L Y +N +P
Sbjct: 726 EDLKAKISESFECTDKGPLHLFLGMEVQRDGDLGEITLGHSQYIKELLRDYGSENCRPAT 785
Query: 351 TPASSDSKSI--QETAQEKEY-PYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTRED 521
TP + + + E Q+ + Y+ +G L++L TRPD+ +V ++++ ++P E
Sbjct: 786 TPLDAGHQVLCAGEQCQKVDAGQYQSTIGELMWLGLTTRPDMLHSVAKLAQRNQDPHSEH 845
Query: 522 VTKLKKIFKYLVGT 563
+ +K I +YL T
Sbjct: 846 MVAVKHILRYLAST 859
>AJ439431-1|CAD28424.1| 76|Drosophila melanogaster reverse
transcriptase protein.
Length = 76
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 3 GLKQAPFTWNKTFTQAMFDLGFKTIKTDRCVFI-NEDKS 116
GLKQ+ WNK + + +GF + ++ CV+ N KS
Sbjct: 32 GLKQSGREWNKLLNEVLQKIGFSSCPSEPCVYTRNSGKS 70
>AE014297-2383|AAF55448.2| 1534|Drosophila melanogaster CG14322-PA
protein.
Length = 1534
Score = 30.7 bits (66), Expect = 1.9
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +3
Query: 363 SDSKSIQETAQEKEYPYREAVGSLLYLSTRTRPDIAQAVNLVSRKVENPTREDVTKLKKI 542
+DSKS A+ + E S ++ RTR + + V +++ K + ++ V+K K
Sbjct: 1060 ADSKSKPHEAETAQESTHEDSFSKGGIARRTRSRLRRTVLVLAPKRQVRVQKRVSKKPKS 1119
Query: 543 FKYLVGTKHKGILFNETNR 599
FK LV H+ I ETN+
Sbjct: 1120 FK-LVEKSHEEIAEQETNK 1137
>BT011539-1|AAS15675.1| 179|Drosophila melanogaster LP13032p
protein.
Length = 179
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 516 EDVTKLKKIFKYLVGTKHKGILFNETNR*RASMLTATRIMLETH 647
ED++ LKK +K G + +G L + R + L + ++ L+ H
Sbjct: 4 EDMSALKKFYKISAGVR-RGALLTSSRRTQIDALNSPQLQLQVH 46
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,805,672
Number of Sequences: 53049
Number of extensions: 623906
Number of successful extensions: 1529
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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