Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12c06
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132859-2|CAB60488.1|  315|Caenorhabditis elegans Hypothetical ...    30   1.8  
AF100306-3|AAC68923.2|  155|Caenorhabditis elegans Hypothetical ...    30   1.8  
Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z95559-3|CAB08998.1|  786|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z22178-6|CAA80158.2|  265|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate cyc...    29   3.1  
AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical ...    29   3.1  
U58755-1|AAB00691.3|  403|Caenorhabditis elegans Nematode astaci...    29   4.1  
L15313-1|AAA28202.1|  305|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z82053-3|CAB04837.2|  240|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z68214-1|CAA92444.1|  846|Caenorhabditis elegans Hypothetical pr...    27   9.4  
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p...    27   9.4  
AF068717-4|AAC17764.2|  357|Caenorhabditis elegans Serpentine re...    27   9.4  
AF039049-6|AAB94249.2|  301|Caenorhabditis elegans Serpentine re...    27   9.4  

>AL132859-2|CAB60488.1|  315|Caenorhabditis elegans Hypothetical
           protein Y39C12A.3 protein.
          Length = 315

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
 Frame = -3

Query: 542 YFLQFCNVFSSGVFDLPAN*IDRLCDIWSGSGRQV-Q*TSHCFPIGIFLLLGSFLYRL*I 366
           YF+    + S  +F L A  ++RLC  +     +  Q     F I IFL++ SF+     
Sbjct: 92  YFMFRAFIKSPPLFALTAIMLERLCATYYVKDYEKNQRPIIPFLIIIFLIILSFIASTVF 151

Query: 365 ATCGRVTRFGIFHVVFFQYVIYVGSL 288
            + G V  FG+ H  F  +V Y+ S+
Sbjct: 152 TSVGMVLYFGVCHFSFI-FVCYIVSV 176


>AF100306-3|AAC68923.2|  155|Caenorhabditis elegans Hypothetical
           protein T24C4.4 protein.
          Length = 155

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 387 FPVSTLNRYLRACHKVWHFSCCIFPVRH 304
           FPV  +  YL A HKV+H  CC   +RH
Sbjct: 67  FPVILI--YLHASHKVYHHGCC-HSIRH 91


>Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 261 NSKEGIILTQRSYINDVLEKYNMKNAKPC 347
           NS +G    +  Y++DVL K   KN+K C
Sbjct: 644 NSIDGYNELREGYVDDVLNKVTQKNSKTC 672


>Z95559-3|CAB08998.1|  786|Caenorhabditis elegans Hypothetical
           protein Y41E3.4 protein.
          Length = 786

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 426 GSLLY-LSTRTRPDIAQAVNLVSRKVENPTREDVTKLKKIFKYLVGTKHKGI 578
           G+LLY L+T+ +P +A    LV + + N   +   +L    +YL+    KGI
Sbjct: 48  GTLLYQLATKLKPQVAAHTPLVVKYIMNDGIKTEPQLSAAIEYLLSHTVKGI 99


>Z22178-6|CAA80158.2|  265|Caenorhabditis elegans Hypothetical
           protein F54C8.6 protein.
          Length = 265

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 22/85 (25%), Positives = 36/85 (42%)
 Frame = -1

Query: 568 CLVPTKYLNIFFNFVTSSLVGFSTFLLTRLTACAISGLVLVDRYSKLPTASL*GYSFSWA 389
           C    K  N    +  S    +  F++ R++  A+   +  +     P+  L    F + 
Sbjct: 54  CTTCKKIENFVMPYYESLKAKYQQFVV-RISDPALHATIRSEFAEYFPSVLLGFAIFFFG 112

Query: 388 VSCIDFESLLAGVSQGLAFFMLYFS 314
           ++ I F  LL GVS   +FF  YFS
Sbjct: 113 ITFISFIKLLRGVSTQPSFFCRYFS 137


>AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate
           cyclase-like protein protein.
          Length = 675

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 261 NSKEGIILTQRSYINDVLEKYNMKNAKPC 347
           NS +G    +  Y++DVL K   KN+K C
Sbjct: 644 NSIDGYNELREGYVDDVLNKVTQKNSKTC 672


>AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 261 NSKEGIILTQRSYINDVLEKYNMKNAKPC 347
           NS +G    +  Y++DVL K   KN+K C
Sbjct: 644 NSIDGYNELREGYVDDVLNKVTQKNSKTC 672


>U58755-1|AAB00691.3|  403|Caenorhabditis elegans Nematode astacin
           protease protein 8 protein.
          Length = 403

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 604 EHRCLQRLGLCWRPIDAKKHFWF 672
           E  C  R  LCWR ID  K F+F
Sbjct: 335 EDDCRDRTNLCWRWIDRCKSFFF 357


>L15313-1|AAA28202.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK353.4 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 210 QMKKNENPSTYLGMEIKNSKEGIILTQRSYINDVLEKYNMKNAKPCDTPASSDSK-SIQE 386
           Q KKN+      G+EI+NS    ++   S  +    +  +K   P  T     SK ++ E
Sbjct: 55  QRKKNQLADETGGIEIENSIRDPVVINNSLASRSCSENKVKKQSPESTEQDDFSKTTVDE 114

Query: 387 TAQEK 401
           T +EK
Sbjct: 115 TIKEK 119


>Z82053-3|CAB04837.2|  240|Caenorhabditis elegans Hypothetical
           protein T26E3.4 protein.
          Length = 240

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +3

Query: 393 QEKEYPYREAVGSL--LYLSTRTRPDIAQAVNLVSRKVENPTRED 521
           QE+E    EA+ S   +++++R  P+I  ++ L S + E+PT +D
Sbjct: 7   QEQEIEALEAIYSEEEIHVASRDYPNIELSIQLKSNQYEDPTDDD 51


>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical protein
            T21C9.6 protein.
          Length = 1215

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 534  KKIFKYLVGTKHKGILFNET 593
            +++ KY +G  H+G+ F ET
Sbjct: 990  RRLLKYFIGQTHRGVSFRET 1009


>Z68214-1|CAA92444.1|  846|Caenorhabditis elegans Hypothetical
           protein C10C5.1 protein.
          Length = 846

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -3

Query: 323 VFFQYVIYVGSLSKNDSFF*VFYFHTQISTWIFILFHLKFGFKFLQN-SFDLFLIFSYDK 147
           V+F +V+ V  L  +  F   FY     + W   L +LKF F+  +  ++  +L  ++  
Sbjct: 678 VYFIFVVSVVLLVVSTCFAPNFYNILFFALWALNLIYLKFSFRLYRGLAYAFWLTLTFYT 737

Query: 146 SII 138
           SI+
Sbjct: 738 SIV 740


>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
            protein R11G1.1 protein.
          Length = 1656

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -2

Query: 432  NFPLLPYRDIPSPGQF-PVSTLNRYLR 355
            N+ + PYRD P P  F P  T +R++R
Sbjct: 1570 NWDISPYRDTPGPSSFLPPITPSRHVR 1596


>AF068717-4|AAC17764.2|  357|Caenorhabditis elegans Serpentine
           receptor, class w protein144 protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 24/81 (29%), Positives = 36/81 (44%)
 Frame = -1

Query: 409 GYSFSWAVSCIDFESLLAGVSQGLAFFMLYFSSTSFM*DL*VRMIPSFEFFISIPR*VLG 230
           GY  + A+S   FESLL  +S  + ++  Y S  S         I  F F I I + +  
Sbjct: 13  GYDNATAISLCQFESLLFEISNRVFYYEHYLSVASI-------FINIFHFLILIHKPLRS 65

Query: 229 FSFFFI*NLVSSFFKIASIFF 167
            S   I   + + F I S+F+
Sbjct: 66  SSINIIMAFI-AIFDICSMFY 85


>AF039049-6|AAB94249.2|  301|Caenorhabditis elegans Serpentine
           receptor, class x protein64 protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 592 VSLNKMPLCLVPTKYLNIFFNFVTSSLVGF 503
           +SLN+      P KY NIF +  T  L+GF
Sbjct: 97  ISLNRFCAVWAPYKYQNIFSDRNTKILIGF 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,956,095
Number of Sequences: 27780
Number of extensions: 346404
Number of successful extensions: 996
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)