Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12c03
         (603 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11651-1|CAA72364.1|  366|Homo sapiens phosphate cyclase protein.      29   9.5  
BC012604-1|AAH12604.1|  379|Homo sapiens RTCD1 protein protein.        29   9.5  
AL663111-2|CAH73852.1|  379|Homo sapiens RNA terminal phosphate ...    29   9.5  
AL663111-1|CAH73853.1|  366|Homo sapiens RNA terminal phosphate ...    29   9.5  
AL445928-12|CAH72260.1|  379|Homo sapiens RNA terminal phosphate...    29   9.5  
AL445928-11|CAH72259.1|  366|Homo sapiens RNA terminal phosphate...    29   9.5  

>Y11651-1|CAA72364.1|  366|Homo sapiens phosphate cyclase protein.
          Length = 366

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +3

Query: 273 HAAQIKMRALLVALLGVSMSACAFASQPVELELDDDDVTQKLSNVSFARRITKPTI 440
           H A  K    +  L+ VSM    FA+ P EL L      +    + +   + KP +
Sbjct: 89  HTADTKTAGSVCLLMQVSMPCVLFAASPSELHLKGGTNAEMAPQIDYTVMVFKPIV 144


>BC012604-1|AAH12604.1|  379|Homo sapiens RTCD1 protein protein.
          Length = 379

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +3

Query: 273 HAAQIKMRALLVALLGVSMSACAFASQPVELELDDDDVTQKLSNVSFARRITKPTI 440
           H A  K    +  L+ VSM    FA+ P EL L      +    + +   + KP +
Sbjct: 102 HTADTKTAGSVCLLMQVSMPCVLFAASPSELHLKGGTNAEMAPQIDYTVMVFKPIV 157


>AL663111-2|CAH73852.1|  379|Homo sapiens RNA terminal phosphate
           cyclase domain 1 protein.
          Length = 379

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +3

Query: 273 HAAQIKMRALLVALLGVSMSACAFASQPVELELDDDDVTQKLSNVSFARRITKPTI 440
           H A  K    +  L+ VSM    FA+ P EL L      +    + +   + KP +
Sbjct: 102 HTADTKTAGSVCLLMQVSMPCVLFAASPSELHLKGGTNAEMAPQIDYTVMVFKPIV 157


>AL663111-1|CAH73853.1|  366|Homo sapiens RNA terminal phosphate
           cyclase domain 1 protein.
          Length = 366

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +3

Query: 273 HAAQIKMRALLVALLGVSMSACAFASQPVELELDDDDVTQKLSNVSFARRITKPTI 440
           H A  K    +  L+ VSM    FA+ P EL L      +    + +   + KP +
Sbjct: 89  HTADTKTAGSVCLLMQVSMPCVLFAASPSELHLKGGTNAEMAPQIDYTVMVFKPIV 144


>AL445928-12|CAH72260.1|  379|Homo sapiens RNA terminal phosphate
           cyclase domain 1 protein.
          Length = 379

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +3

Query: 273 HAAQIKMRALLVALLGVSMSACAFASQPVELELDDDDVTQKLSNVSFARRITKPTI 440
           H A  K    +  L+ VSM    FA+ P EL L      +    + +   + KP +
Sbjct: 102 HTADTKTAGSVCLLMQVSMPCVLFAASPSELHLKGGTNAEMAPQIDYTVMVFKPIV 157


>AL445928-11|CAH72259.1|  366|Homo sapiens RNA terminal phosphate
           cyclase domain 1 protein.
          Length = 366

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +3

Query: 273 HAAQIKMRALLVALLGVSMSACAFASQPVELELDDDDVTQKLSNVSFARRITKPTI 440
           H A  K    +  L+ VSM    FA+ P EL L      +    + +   + KP +
Sbjct: 89  HTADTKTAGSVCLLMQVSMPCVLFAASPSELHLKGGTNAEMAPQIDYTVMVFKPIV 144


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,281,882
Number of Sequences: 237096
Number of extensions: 1592040
Number of successful extensions: 3452
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3452
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)