Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12c02
         (629 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    24   1.4  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   5.7  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   7.5  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    21   9.9  

>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/57 (19%), Positives = 26/57 (45%)
 Frame = +1

Query: 373 QRQHRRRLLSYLLQSTKKFYAARNELKRVTEMCQKQHTQLKEYHKRIKALETQLANQ 543
           Q  H R     +    K+ Y++ N L+    +  +QH++ ++  K ++ +  +   Q
Sbjct: 23  QNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQHSKNEQQRKEMEQMREREREQ 79


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 532 LANQSSRQVSPFNIPISPTNNISPSFIQTTPS 627
           L N  +   + F +P    N I+P F   +PS
Sbjct: 33  LMNTMTHTTNAFCLPFCGPNVINPFFCDMSPS 64


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 386 EGDCSLIYYNRQKSFTRHAMN 448
           +GD  ++Y N  +SF R   N
Sbjct: 210 KGDALIVYQNSDESFHRLTSN 230


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/21 (33%), Positives = 9/21 (42%)
 Frame = +1

Query: 211 CNNCLGNGLKDSTCLVCRMPC 273
           CN C+G   +   C     PC
Sbjct: 87  CNKCIGCSAEKFECSKTSNPC 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,435
Number of Sequences: 438
Number of extensions: 3310
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)