Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12b24
(547 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ174517-1|ABA08383.1| 102|Homo sapiens Slu7 protein. 78 2e-14
DQ174516-1|ABA08382.1| 101|Homo sapiens Slu7 protein. 78 2e-14
BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor ho... 78 2e-14
AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor... 78 2e-14
AY486334-1|AAS59410.1| 60|Homo sapiens splicing factor protein. 56 6e-08
BC064830-1|AAH64830.1| 603|Homo sapiens TAF2 protein protein. 30 6.1
BC047732-1|AAH47732.1| 604|Homo sapiens TAF2 protein protein. 30 6.1
BC035673-1|AAH35673.1| 604|Homo sapiens TAF2 protein protein. 30 6.1
AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor T... 30 6.1
AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein as... 30 6.1
AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator f... 30 6.1
>DQ174517-1|ABA08383.1| 102|Homo sapiens Slu7 protein.
Length = 102
Score = 78.2 bits (184), Expect = 2e-14
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +3
Query: 417 SREDWRKAKELEEARKAGTAPAAVDETGKDINPHIPQYIASAP 545
+REDWRK KELEE RK G APA VDE GKDINPHIPQYI+S P
Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVP 71
>DQ174516-1|ABA08382.1| 101|Homo sapiens Slu7 protein.
Length = 101
Score = 78.2 bits (184), Expect = 2e-14
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +3
Query: 417 SREDWRKAKELEEARKAGTAPAAVDETGKDINPHIPQYIASAP 545
+REDWRK KELEE RK G APA VDE GKDINPHIPQYI+S P
Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVP 71
>BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor
homolog (S. cerevisiae) protein.
Length = 586
Score = 78.2 bits (184), Expect = 2e-14
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +3
Query: 417 SREDWRKAKELEEARKAGTAPAAVDETGKDINPHIPQYIASAP 545
+REDWRK KELEE RK G APA VDE GKDINPHIPQYI+S P
Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVP 71
>AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor
SLU7 protein.
Length = 586
Score = 78.2 bits (184), Expect = 2e-14
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +3
Query: 417 SREDWRKAKELEEARKAGTAPAAVDETGKDINPHIPQYIASAP 545
+REDWRK KELEE RK G APA VDE GKDINPHIPQYI+S P
Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVP 71
>AY486334-1|AAS59410.1| 60|Homo sapiens splicing factor protein.
Length = 60
Score = 56.4 bits (130), Expect = 6e-08
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +3
Query: 417 SREDWRKAKELEEARKAGTAPAAVDETGKDIN 512
+REDWRK KELEE RK G APA VDE GKDIN
Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDIN 60
>BC064830-1|AAH64830.1| 603|Homo sapiens TAF2 protein protein.
Length = 603
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 241 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 92
NINF + + +L F T++ L ++ +CR + +RI+ + FIY
Sbjct: 37 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86
>BC047732-1|AAH47732.1| 604|Homo sapiens TAF2 protein protein.
Length = 604
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 241 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 92
NINF + + +L F T++ L ++ +CR + +RI+ + FIY
Sbjct: 37 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86
>BC035673-1|AAH35673.1| 604|Homo sapiens TAF2 protein protein.
Length = 604
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 241 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 92
NINF + + +L F T++ L ++ +CR + +RI+ + FIY
Sbjct: 37 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86
>AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor
TAFII150 protein.
Length = 1199
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 241 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 92
NINF + + +L F T++ L ++ +CR + +RI+ + FIY
Sbjct: 37 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86
>AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein
associated factor protein.
Length = 1189
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 241 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 92
NINF + + +L F T++ L ++ +CR + +RI+ + FIY
Sbjct: 27 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 76
>AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator
function protein.
Length = 1199
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 241 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 92
NINF + + +L F T++ L ++ +CR + +RI+ + FIY
Sbjct: 37 NINFHRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,034,599
Number of Sequences: 237096
Number of extensions: 988295
Number of successful extensions: 1850
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1850
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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