Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12b22
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   1.6  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    25   2.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   6.3  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 375 KMWFDGVPVLFIPGNSGSHMQARSLASVALRK 470
           K+W DG  +L++ GN   H Q    A   +RK
Sbjct: 823 KLW-DGYSLLYVDGNDYPHNQDLGSAGSCVRK 853


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 498 NGNHILQTRLFLRPQMPVILLACDYQ 421
           NGN + QT++  + Q P++  +C  Q
Sbjct: 99  NGNPLQQTQVQPQQQQPIVYASCKLQ 124


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 223  FKTPKRYPRRNNSD 182
            FKTP  YP + N D
Sbjct: 1122 FKTPTGYPEKENDD 1135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,433
Number of Sequences: 2352
Number of extensions: 12777
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)