Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12b20
         (638 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019272-1|AAH19272.1|  142|Homo sapiens thioredoxin-like 4A pro...    58   2e-08
BC001046-1|AAH01046.1|  142|Homo sapiens thioredoxin-like 4A pro...    58   2e-08
AF146373-1|AAF17332.1|  142|Homo sapiens thioredoxin-like U5 snR...    58   2e-08
AF023612-1|AAB81951.1|   91|Homo sapiens Dim1p homolog protein.        58   2e-08
AF023611-1|AAB81950.1|  142|Homo sapiens Dim1p homolog protein.        58   2e-08
Z98304-8|CAM28265.1|  639|Homo sapiens zinc finger protein 182 p...    31   3.4  
Z98304-7|CAC41951.1|  620|Homo sapiens zinc finger protein 182 p...    31   3.4  
BC114216-1|AAI14217.1|  620|Homo sapiens zinc finger protein 182...    31   3.4  
BC106875-1|AAI06876.1|  639|Homo sapiens zinc finger protein 182...    31   3.4  
AL008583-2|CAA15430.2|  488|Homo sapiens neuronal pentraxin rece...    30   8.0  

>BC019272-1|AAH19272.1|  142|Homo sapiens thioredoxin-like 4A
           protein.
          Length = 142

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +1

Query: 424 MSYMLGHLHNGWQVDQAILSEEDRVVV 504
           MSYML HLHNGWQVDQAILSEEDRVVV
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVV 27


>BC001046-1|AAH01046.1|  142|Homo sapiens thioredoxin-like 4A
           protein.
          Length = 142

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +1

Query: 424 MSYMLGHLHNGWQVDQAILSEEDRVVV 504
           MSYML HLHNGWQVDQAILSEEDRVVV
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVV 27


>AF146373-1|AAF17332.1|  142|Homo sapiens thioredoxin-like U5 snRNP
           protein U5-15kD protein.
          Length = 142

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +1

Query: 424 MSYMLGHLHNGWQVDQAILSEEDRVVV 504
           MSYML HLHNGWQVDQAILSEEDRVVV
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVV 27


>AF023612-1|AAB81951.1|   91|Homo sapiens Dim1p homolog protein.
          Length = 91

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +1

Query: 424 MSYMLGHLHNGWQVDQAILSEEDRVVV 504
           MSYML HLHNGWQVDQAILSEEDRVVV
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVV 27


>AF023611-1|AAB81950.1|  142|Homo sapiens Dim1p homolog protein.
          Length = 142

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +1

Query: 424 MSYMLGHLHNGWQVDQAILSEEDRVVV 504
           MSYML HLHNGWQVDQAILSEEDRVVV
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVV 27


>Z98304-8|CAM28265.1|  639|Homo sapiens zinc finger protein 182
           protein.
          Length = 639

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 156 NKKDNACSKLFEHTSIENVNSDEK 227
           NK DN C+KLF HT  E  N   K
Sbjct: 181 NKYDNGCAKLFFHTEYEKTNPGMK 204


>Z98304-7|CAC41951.1|  620|Homo sapiens zinc finger protein 182
           protein.
          Length = 620

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 156 NKKDNACSKLFEHTSIENVNSDEK 227
           NK DN C+KLF HT  E  N   K
Sbjct: 162 NKYDNGCAKLFFHTEYEKTNPGMK 185


>BC114216-1|AAI14217.1|  620|Homo sapiens zinc finger protein 182
           protein.
          Length = 620

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 156 NKKDNACSKLFEHTSIENVNSDEK 227
           NK DN C+KLF HT  E  N   K
Sbjct: 162 NKYDNGCAKLFFHTEYEKTNPGMK 185


>BC106875-1|AAI06876.1|  639|Homo sapiens zinc finger protein 182
           protein.
          Length = 639

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 156 NKKDNACSKLFEHTSIENVNSDEK 227
           NK DN C+KLF HT  E  N   K
Sbjct: 181 NKYDNGCAKLFFHTEYEKTNPGMK 204


>AL008583-2|CAA15430.2|  488|Homo sapiens neuronal pentraxin
           receptor protein.
          Length = 488

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +3

Query: 375 RNNRLFEIIRKVVYLQNELYARTSTQWLASRSGHSIRRRPCS 500
           RNN ++  +RK +    ELYA T+  WL SRS  + +  P S
Sbjct: 289 RNNYMYARVRKAL---PELYAFTACMWLRSRSSGTGQGTPFS 327


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,073,478
Number of Sequences: 237096
Number of extensions: 1431513
Number of successful extensions: 1926
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1926
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)