Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12b18
         (381 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-P...    28   4.7  
AY058643-1|AAL13872.1|  395|Drosophila melanogaster LD34202p pro...    27   6.2  
AF172258-1|AAF87944.1|  395|Drosophila melanogaster innexin 3 pr...    27   6.2  
AE014297-4277|AAF56822.1|  395|Drosophila melanogaster CG1448-PA...    27   6.2  

>AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-PA
            protein.
          Length = 1519

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = -1

Query: 303  HMLKISRIIV*SQLRTALLM*LSVFFNIYFSFNYLIFCATCSIV 172
            H++KISRI+  +  + AL + + V  N + +  ++I    C+I+
Sbjct: 1006 HIVKISRIVTDATTKDALQISIDVINNGFQAQEFIIHICNCNIL 1049


>AY058643-1|AAL13872.1|  395|Drosophila melanogaster LD34202p
           protein.
          Length = 395

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = -1

Query: 264 LRTALLM*LSVFFNIYFSFNYLIFCA---TCSIVAICNNTASYTLNFITSIFCKMHIVKT 94
           ++   L+  +V  N+ F  +Y I  A   TC I+   NN     ++ I      MH++ T
Sbjct: 14  IKIRYLLDKAVIDNMVFRCHYRITTAILFTCCIIVTANNLIGDPISCINDGAIPMHVINT 73

Query: 93  *LFCSIS 73
             FC I+
Sbjct: 74  --FCWIT 78


>AF172258-1|AAF87944.1|  395|Drosophila melanogaster innexin 3
           protein.
          Length = 395

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = -1

Query: 264 LRTALLM*LSVFFNIYFSFNYLIFCA---TCSIVAICNNTASYTLNFITSIFCKMHIVKT 94
           ++   L+  +V  N+ F  +Y I  A   TC I+   NN     ++ I      MH++ T
Sbjct: 14  IKIRYLLDKAVIDNMVFRCHYRITTAILFTCCIIVTANNLIGDPISCINDGAIPMHVINT 73

Query: 93  *LFCSIS 73
             FC I+
Sbjct: 74  --FCWIT 78


>AE014297-4277|AAF56822.1|  395|Drosophila melanogaster CG1448-PA
           protein.
          Length = 395

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = -1

Query: 264 LRTALLM*LSVFFNIYFSFNYLIFCA---TCSIVAICNNTASYTLNFITSIFCKMHIVKT 94
           ++   L+  +V  N+ F  +Y I  A   TC I+   NN     ++ I      MH++ T
Sbjct: 14  IKIRYLLDKAVIDNMVFRCHYRITTAILFTCCIIVTANNLIGDPISCINDGAIPMHVINT 73

Query: 93  *LFCSIS 73
             FC I+
Sbjct: 74  --FCWIT 78


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,544,830
Number of Sequences: 53049
Number of extensions: 182214
Number of successful extensions: 305
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)