Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12b15
         (555 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75551-3|CAA99936.2|  547|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z82072-1|CAB04920.2|  467|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z81050-5|CAB02855.2|  367|Caenorhabditis elegans Hypothetical pr...    28   5.2  
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr...    28   5.2  
U32305-1|AAK18854.2|  469|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AL032636-6|CAB54421.1|  467|Caenorhabditis elegans Hypothetical ...    28   5.2  
Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z48334-5|CAA88312.1|  424|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U00065-8|AAL02473.1|  501|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr...    27   6.9  
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    27   6.9  

>Z75551-3|CAA99936.2|  547|Caenorhabditis elegans Hypothetical
           protein W04D2.6b protein.
          Length = 547

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +3

Query: 375 NRPKVWRTIPYSRSAAGILRSASSFSGSNQEHPVLCEGHWRIPQRARTSVRAR 533
           NRP+  +    SRS++    S+ S S S++          R PQR+RTS R R
Sbjct: 87  NRPEASKRSRRSRSSSN--SSSESDSSSSRSSSYSSRSRSRTPQRSRTSKRRR 137


>Z82072-1|CAB04920.2|  467|Caenorhabditis elegans Hypothetical
           protein W05H12.1 protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = +1

Query: 274 IACGSMTTDE---EEIDPVGNATSNVNSVDPGQ-FATKIDQRYGGQYLTPDQLPE 426
           + C S T ++   EE+DP G AT    +++    F TK D+   G+ L   Q+PE
Sbjct: 262 LGCASFTGEDPLPEELDPTGCATFTSENLEVKTCFKTK-DKAAVGRALASKQIPE 315


>Z81050-5|CAB02855.2|  367|Caenorhabditis elegans Hypothetical
           protein C50B6.6 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 208 DHHKYNLLDKRFSVTSSGVSENIACGSMTTDEEEIDPV 321
           DH+K +L DK     + G+S ++ C ++ T    IDPV
Sbjct: 173 DHYKQDLYDK-----NPGISIHVLCNTVVTAPPLIDPV 205


>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
           protein ZK154.5 protein.
          Length = 1105

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 243 KSFIKQVVLVMVTSESTEKPAEETGLPPTALHYSTPI 133
           K  +K  V+V+   ++ EKPA  TG P   +    PI
Sbjct: 487 KMLVKNKVVVVNQHQAQEKPANSTGFPRPIIPIPWPI 523


>U32305-1|AAK18854.2|  469|Caenorhabditis elegans Hypothetical
           protein B0336.6 protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 262 VSENIACGSMTTDEEEIDPVGNATSNVNSVDPGQF 366
           V + I  G  T+D     P+  ATS+++   P QF
Sbjct: 147 VLDGIGHGVRTSDPPRAAPISRATSSISGSSPSQF 181


>AL032636-6|CAB54421.1|  467|Caenorhabditis elegans Hypothetical
           protein W05H12.1 protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = +1

Query: 274 IACGSMTTDE---EEIDPVGNATSNVNSVDPGQ-FATKIDQRYGGQYLTPDQLPE 426
           + C S T ++   EE+DP G AT    +++    F TK D+   G+ L   Q+PE
Sbjct: 262 LGCASFTGEDPLPEELDPTGCATFTSENLEVKTCFKTK-DKAAVGRALASKQIPE 315


>Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical
           protein T16G1.1 protein.
          Length = 695

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -3

Query: 217 CDGHLGVYREAC*GDGTASHRPPLFHPNF 131
           C   LGVY E     GTA  R P+  P F
Sbjct: 54  CTQQLGVYNETSCPGGTACERFPILIPGF 82


>Z48334-5|CAA88312.1|  424|Caenorhabditis elegans Hypothetical
           protein F10B5.5 protein.
          Length = 424

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -2

Query: 350 TELTLEVALPTGSISSSSVVMLPQAIFSLTPED 252
           TE+  ++A     +S  ++ MLP  ++S +PE+
Sbjct: 369 TEILFKIAQEARGLSGRAISMLPTLVYSKSPEE 401


>U00065-8|AAL02473.1|  501|Caenorhabditis elegans Hypothetical
           protein D1044.2b protein.
          Length = 501

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/66 (22%), Positives = 28/66 (42%)
 Frame = +1

Query: 244 SVTSSGVSENIACGSMTTDEEEIDPVGNATSNVNSVDPGQFATKIDQRYGGQYLTPDQLP 423
           S   +G+  + A  S+       + +   + N N   PG +  +ID+        P Q+P
Sbjct: 15  SGAEAGILSSDASSSILLPASGTEAISQLSKNSNIKQPGTWLYRIDKAQLMPCAQPIQVP 74

Query: 424 EFCAQL 441
            +C +L
Sbjct: 75  PYCDRL 80


>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
           protein D1044.2c protein.
          Length = 1090

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/66 (22%), Positives = 28/66 (42%)
 Frame = +1

Query: 244 SVTSSGVSENIACGSMTTDEEEIDPVGNATSNVNSVDPGQFATKIDQRYGGQYLTPDQLP 423
           S   +G+  + A  S+       + +   + N N   PG +  +ID+        P Q+P
Sbjct: 565 SGAEAGILSSDASSSILLPASGTEAISQLSKNSNIKQPGTWLYRIDKAQLMPCAQPIQVP 624

Query: 424 EFCAQL 441
            +C +L
Sbjct: 625 PYCDRL 630


>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
           protein D1044.2a protein.
          Length = 1051

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/66 (22%), Positives = 28/66 (42%)
 Frame = +1

Query: 244 SVTSSGVSENIACGSMTTDEEEIDPVGNATSNVNSVDPGQFATKIDQRYGGQYLTPDQLP 423
           S   +G+  + A  S+       + +   + N N   PG +  +ID+        P Q+P
Sbjct: 565 SGAEAGILSSDASSSILLPASGTEAISQLSKNSNIKQPGTWLYRIDKAQLMPCAQPIQVP 624

Query: 424 EFCAQL 441
            +C +L
Sbjct: 625 PYCDRL 630


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
            protein Y53C10A.10 protein.
          Length = 1582

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -1

Query: 207  TSESTEKPA-EETGLPPTALHYSTPIFIS*TE*YCRNGYI 91
            T+ STE P  +E     T L  +TP   S TE + R G+I
Sbjct: 887  TTSSTEPPTTQEESNTTTTLSSTTPFTTSSTESFTRGGFI 926


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,620,232
Number of Sequences: 27780
Number of extensions: 226576
Number of successful extensions: 727
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)