BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12b05
(640 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC069730-1|AAH69730.1| 336|Homo sapiens ATF7IP2 protein protein. 30 6.0
BC069713-1|AAH69713.1| 336|Homo sapiens ATF7IP2 protein protein. 30 6.0
BC069695-1|AAH69695.1| 336|Homo sapiens ATF7IP2 protein protein. 30 6.0
BC033891-1|AAH33891.1| 681|Homo sapiens activating transcriptio... 30 6.0
AY560615-1|AAT66299.1| 681|Homo sapiens MBD1-containing chromat... 30 6.0
AK223492-1|BAD97212.1| 358|Homo sapiens activating transcriptio... 30 6.0
AK093414-1|BAC04157.1| 543|Homo sapiens protein ( Homo sapiens ... 30 6.0
AK022730-1|BAB14209.1| 293|Homo sapiens protein ( Homo sapiens ... 30 6.0
>BC069730-1|AAH69730.1| 336|Homo sapiens ATF7IP2 protein protein.
Length = 336
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 483 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 623
++ E VN+ + +S+ N+ P+EK S K N + Q++SVS +N
Sbjct: 62 DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 106
>BC069713-1|AAH69713.1| 336|Homo sapiens ATF7IP2 protein protein.
Length = 336
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 483 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 623
++ E VN+ + +S+ N+ P+EK S K N + Q++SVS +N
Sbjct: 62 DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 106
>BC069695-1|AAH69695.1| 336|Homo sapiens ATF7IP2 protein protein.
Length = 336
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 483 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 623
++ E VN+ + +S+ N+ P+EK S K N + Q++SVS +N
Sbjct: 62 DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 106
>BC033891-1|AAH33891.1| 681|Homo sapiens activating transcription
factor 7 interacting protein 2 protein.
Length = 681
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 483 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 623
++ E VN+ + +S+ N+ P+EK S K N + Q++SVS +N
Sbjct: 407 DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 451
>AY560615-1|AAT66299.1| 681|Homo sapiens MBD1-containing chromatin
associated factor 2 protein.
Length = 681
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 483 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 623
++ E VN+ + +S+ N+ P+EK S K N + Q++SVS +N
Sbjct: 407 DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 451
>AK223492-1|BAD97212.1| 358|Homo sapiens activating transcription
factor 7 interacting protein 2 variant protein.
Length = 358
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 483 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 623
++ E VN+ + +S+ N+ P+EK S K N + Q++SVS +N
Sbjct: 84 DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 128
>AK093414-1|BAC04157.1| 543|Homo sapiens protein ( Homo sapiens
cDNA FLJ36095 fis, clone TESTI2020905. ).
Length = 543
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 483 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 623
++ E VN+ + +S+ N+ P+EK S K N + Q++SVS +N
Sbjct: 408 DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 452
>AK022730-1|BAB14209.1| 293|Homo sapiens protein ( Homo sapiens
cDNA FLJ12668 fis, clone NT2RM4002287. ).
Length = 293
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 483 ERQAELVNTNVYESTENFHFNGDEPTEKVSNKTNKNITQHESVSNAN 623
++ E VN+ + +S+ N+ P+EK S K N + Q++SVS +N
Sbjct: 19 DKNLESVNSPIEKSSVNYE--PSNPSEKGSKKINLSSDQNKSVSESN 63
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,706,356
Number of Sequences: 237096
Number of extensions: 2060854
Number of successful extensions: 5290
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5290
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -