Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12b03
(680 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 2.0
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.2
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 6.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 6.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 6.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 6.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 6.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 6.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 6.2
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 6.2
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.2
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 6.2
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 73 RDSGQNKPSFNFVNNEQEDKEADCE 147
R+ QN SFN E EA+C+
Sbjct: 1865 RNHDQNNSSFNDSKESNEISEAECD 1889
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 322 NFLGFDNPNILKLTKMKWLSENNDEALDSRKFNAL 426
N++G ++ I ++ + W S N D + S K A+
Sbjct: 796 NYVGSEDSVIPRILYLTWYSSNGDIKVPSTKVLAM 830
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 534 HI*EHALLPHHLHRVPV 584
H HA PHH H P+
Sbjct: 432 HHHSHAATPHHQHSTPL 448
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.2
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +2
Query: 485 NNNNYDEHKQIH 520
NNNNY+ +K+++
Sbjct: 99 NNNNYNNYKKLY 110
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 6.2
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +2
Query: 485 NNNNYDEHKQIH 520
NNNNY+ +K+++
Sbjct: 99 NNNNYNNYKKLY 110
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.2
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +2
Query: 485 NNNNYDEHKQIH 520
NNNNY+ +K+++
Sbjct: 99 NNNNYNNYKKLY 110
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.2
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +2
Query: 485 NNNNYDEHKQIH 520
NNNNY+ +K+++
Sbjct: 99 NNNNYNNYKKLY 110
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.2
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +2
Query: 485 NNNNYDEHKQIH 520
NNNNY+ +K+++
Sbjct: 99 NNNNYNNYKKLY 110
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.2
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +2
Query: 485 NNNNYDEHKQIH 520
NNNNY+ +K+++
Sbjct: 99 NNNNYNNYKKLY 110
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.2
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +2
Query: 485 NNNNYDEHKQIH 520
NNNNY+ +K+++
Sbjct: 99 NNNNYNNYKKLY 110
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.2
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +2
Query: 485 NNNNYDEHKQIH 520
NNNNY+ +K+++
Sbjct: 99 NNNNYNNYKKLY 110
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +2
Query: 485 NNNNYDEHKQIH 520
NNNNY+ +K+++
Sbjct: 97 NNNNYNNYKKLY 108
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 6.2
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +2
Query: 485 NNNNYDEHKQIH 520
NNNNY+ +K+++
Sbjct: 107 NNNNYNNYKKLY 118
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 6.2
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +2
Query: 485 NNNNYDEHKQIH 520
NNNNY+ +K+++
Sbjct: 342 NNNNYNNYKKLY 353
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 328 LGFDNPNILKLTKMKWLSENNDEALDSR 411
LG+ I ++ K KW N E L +R
Sbjct: 610 LGYQKGGISEIQKHKWFDGFNWEGLRAR 637
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,174
Number of Sequences: 438
Number of extensions: 3793
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -