Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12b01
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 87 9e-18
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 82 4e-16
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 82 4e-16
Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 72 3e-13
AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 72 3e-13
AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 72 3e-13
Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical p... 70 2e-12
Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical ... 67 1e-11
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 58 5e-09
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 58 5e-09
Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical p... 57 1e-08
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical ... 36 0.028
U23484-1|AAC46766.2| 459|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 29 4.2
Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical pr... 28 5.6
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 28 7.4
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 27 9.8
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 87.4 bits (207), Expect = 9e-18
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Frame = +1
Query: 295 LKQIVPTNKPKKRKVKLMNWKKYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKM 474
L++ V + +++KV+ N +YH + +++ L YP + +V IG + EGR I +
Sbjct: 104 LRKQVRLHDWREQKVQF-NLAQYHSFADVINYLNSLAITYPELVSVQPIGTTHEGRQIPL 162
Query: 475 LKISN--SDARNSAIWLDASIHSREWISTAVVTYIADYIARNFH---SLPTSITNKDWHI 639
+KI+N + IW+D IH+REW+S + V Y + + + + +W+I
Sbjct: 163 IKITNKRNGGTKRGIWVDGGIHAREWVSPSTVLYFIHQLVTQYDKDVQIKQFVDQLEWYI 222
Query: 640 VPILNPDGYEYT 675
VP+LNPDGYEY+
Sbjct: 223 VPLLNPDGYEYS 234
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 81.8 bits (193), Expect = 4e-16
Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 6/114 (5%)
Frame = +1
Query: 352 WKKYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKIS---NSDARNSAIWLD 522
+ KY+ L I + L+++YP + T+ IGQS E R + ++KI+ N ++W+D
Sbjct: 125 YDKYNSLEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWID 184
Query: 523 ASIHSREWISTAVVTYIADYIARNFHSLPT---SITNKDWHIVPILNPDGYEYT 675
A IH+REWI+ A YIA + + + T + + D++I+P++NPDGYEY+
Sbjct: 185 AGIHAREWIAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYEYS 238
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 81.8 bits (193), Expect = 4e-16
Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 6/114 (5%)
Frame = +1
Query: 352 WKKYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKIS---NSDARNSAIWLD 522
+ KY+ L I + L+++YP + T+ IGQS E R + ++KI+ N ++W+D
Sbjct: 125 YDKYNSLEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWID 184
Query: 523 ASIHSREWISTAVVTYIADYIARNFHSLPT---SITNKDWHIVPILNPDGYEYT 675
A IH+REWI+ A YIA + + + T + + D++I+P++NPDGYEY+
Sbjct: 185 AGIHAREWIAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYEYS 238
>Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical
protein R11A5.7 protein.
Length = 664
Score = 73.3 bits (172), Expect = 1e-13
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Frame = +1
Query: 388 FIDELERDYPAICTVSVIGQSVEGRDIKMLKI-SNSDARNSAIWLDASIHSREWISTAVV 564
++ +E YP I + IG + EG+ I+ LKI + S + A+W+D +IH+REW S+
Sbjct: 170 YMRTIEFYYPRIAKIVRIGATHEGKPIEGLKIGARSSHKKRAVWVDGNIHAREWASSHTA 229
Query: 565 TYIADYIARNFHSLPTSITNK----DWHIVPILNPDGYEYT 675
Y + + + ITN D++IVP LNPDGYEYT
Sbjct: 230 LYFINQLVSEYGK-DAQITNYVDTLDFYIVPCLNPDGYEYT 269
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Frame = +1
Query: 358 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNS--AIWLDASI 531
+YH I ++ ++ER YP V +G + EGR I+ +KI + RN W+D I
Sbjct: 140 EYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRNDKRIFWIDGGI 199
Query: 532 HSREWISTAVVTYIADYIARNFHS---LPTSITNKDWHIVPILNPDGYEYT 675
H+REW + + D + +++ + ++ +++I+P+ NPDGYEY+
Sbjct: 200 HAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVANPDGYEYS 250
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Frame = +1
Query: 358 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNS--AIWLDASI 531
+YH I ++ ++ER YP V +G + EGR I+ +KI + RN W+D I
Sbjct: 140 EYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRNDKRIFWIDGGI 199
Query: 532 HSREWISTAVVTYIADYIARNFHS---LPTSITNKDWHIVPILNPDGYEYT 675
H+REW + + D + +++ + ++ +++I+P+ NPDGYEY+
Sbjct: 200 HAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVANPDGYEYS 250
>AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical
protein Y47G6A.19b protein.
Length = 438
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Frame = +1
Query: 358 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHS 537
+Y+ +V+ +++ + + P I + +G ++EGRDI LK + +DA IH+
Sbjct: 95 EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPDKKIVVIDAGIHA 154
Query: 538 REWISTAVVTYIADYIARNFHSLP---TSITNKDWHIVPILNPDGYEYT 675
REW + +Y + I P + N +I+P+LNPDGYEYT
Sbjct: 155 REWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEYT 203
>AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.19a protein.
Length = 468
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Frame = +1
Query: 358 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHS 537
+Y+ +V+ +++ + + P I + +G ++EGRDI LK + +DA IH+
Sbjct: 95 EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPDKKIVVIDAGIHA 154
Query: 538 REWISTAVVTYIADYIARNFHSLP---TSITNKDWHIVPILNPDGYEYT 675
REW + +Y + I P + N +I+P+LNPDGYEYT
Sbjct: 155 REWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEYT 203
>AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical
protein Y47G6A.19c protein.
Length = 464
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Frame = +1
Query: 358 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHS 537
+Y+ +V+ +++ + + P I + +G ++EGRDI LK + +DA IH+
Sbjct: 95 EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPDKKIVVIDAGIHA 154
Query: 538 REWISTAVVTYIADYIARNFHSLP---TSITNKDWHIVPILNPDGYEYT 675
REW + +Y + I P + N +I+P+LNPDGYEYT
Sbjct: 155 REWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEYT 203
>Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/96 (35%), Positives = 53/96 (55%)
Frame = +1
Query: 388 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHSREWISTAVVT 567
F++ L + YP + IG S EGR I ++I++ + +W+DA IH+REWIS V
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIHAREWISYNVAL 187
Query: 568 YIADYIARNFHSLPTSITNKDWHIVPILNPDGYEYT 675
Y+ Y + + + + +VP NPDGYEY+
Sbjct: 188 YLI-YTIVSQPAYRNLLDSVQLVVVPNTNPDGYEYS 222
>Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/96 (35%), Positives = 53/96 (55%)
Frame = +1
Query: 388 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHSREWISTAVVT 567
F++ L + YP + IG S EGR I ++I++ + +W+DA IH+REWIS V
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIHAREWISYNVAL 187
Query: 568 YIADYIARNFHSLPTSITNKDWHIVPILNPDGYEYT 675
Y+ Y + + + + +VP NPDGYEY+
Sbjct: 188 YLI-YTIVSQPAYRNLLDSVQLVVVPNTNPDGYEYS 222
>AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical
protein Y59C2A.1 protein.
Length = 454
Score = 66.9 bits (156), Expect = 1e-11
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Frame = +1
Query: 316 NKPKKRKVKLMNWKK-----YHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLK 480
N ++RK + W++ YH N + F+ L + + + S EGR I +K
Sbjct: 127 NSVRRRKRAMKTWQEFDTNAYHSYNEMVEFMKLLSEQKSDMVEMVKVATSSEGRSIYGVK 186
Query: 481 I---SNSDARNSAIWLDASIHSREWISTAVVTYIADYIARNFHSLPTSITNK---DWHIV 642
I S +I +DA +H+REWI+ AV ++ I + P N DW+I+
Sbjct: 187 IHPPGPSPPEKPSIIVDAGVHAREWIAPAVGLFMIRKIVEEYGRNPQVTANLQKFDWYIM 246
Query: 643 PILNPDGYEYT 675
P +NPDGYEY+
Sbjct: 247 PQVNPDGYEYS 257
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 58.4 bits (135), Expect = 5e-09
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +1
Query: 388 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHSREWIST-AVV 564
++ +L YP + IG++ EGR+I ++I W+D IH+REW + +
Sbjct: 137 WMKQLVVKYPKMVQYISIGKTTEGRNIDGVEIGGDSRTKKIFWIDGGIHAREWAAPHTAL 196
Query: 565 TYIADYIAR-NFHSLPTSITNKDWHIVPILNPDGYEYT 675
+I +R N + + + +VP LNPDGYE+T
Sbjct: 197 FFIHQLTSRANEPGIKKLLNEITFVVVPCLNPDGYEFT 234
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 58.4 bits (135), Expect = 5e-09
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +1
Query: 388 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHSREWIST-AVV 564
++ +L YP + IG++ EGR+I ++I W+D IH+REW + +
Sbjct: 137 WMKQLVVKYPKMVQYISIGKTTEGRNIDGVEIGGDSRTKKIFWIDGGIHAREWAAPHTAL 196
Query: 565 TYIADYIAR-NFHSLPTSITNKDWHIVPILNPDGYEYT 675
+I +R N + + + +VP LNPDGYE+T
Sbjct: 197 FFIHQLTSRANEPGIKKLLNEITFVVVPCLNPDGYEFT 234
>Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +1
Query: 388 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNS---DARNSAIWLDASIHSREWISTA 558
+I + D P+ + IG++ EGR + ++I R A+WLD H+REW +
Sbjct: 44 YIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHAREWPAFH 103
Query: 559 VVTYIADYIARNFHS---LPTSITNKDWHIVPILNPDGYEYT 675
V Y + + + S + + D ++ P+LNPDG+ Y+
Sbjct: 104 VAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGFVYS 145
>Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +1
Query: 388 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNS---DARNSAIWLDASIHSREWISTA 558
+I + D P+ + IG++ EGR + ++I R A+WLD H+REW +
Sbjct: 44 YIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHAREWPAFH 103
Query: 559 VVTYIADYIARNFHS---LPTSITNKDWHIVPILNPDGYEYT 675
V Y + + + S + + D ++ P+LNPDG+ Y+
Sbjct: 104 VAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGFVYS 145
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 55.2 bits (127), Expect = 4e-08
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Frame = +1
Query: 358 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNS----AIWLDA 525
K H N + A++ +YP I + G+SVEGR++ +L IS+ + + +
Sbjct: 77 KNHNYNEMTAWLKATRLNYPNITHLYSAGKSVEGRELWVLIISDKPKEHKLMEPELKIVG 136
Query: 526 SIHSREWISTAVVTYIADYIARNFHS---LPTSITNKDWHIVPILNPDGYE 669
++H E + V Y+A+ + N+ L + N H++P +NPDGYE
Sbjct: 137 NMHGNEVVGREAVLYLAEILCLNYGKNKYLTDLVNNARIHLMPSMNPDGYE 187
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Frame = +1
Query: 352 WKKYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARN----SAIWL 519
W YH + A + E+ P I T+ IGQSVEGR + +++ S + + + L
Sbjct: 37 WGHYHNQAQLEAKLGEINEKCPEITTLYEIGQSVEGRPLVVIQFSTTPGEHIPTKPEVKL 96
Query: 520 DASIHSREWISTAVVTYIADYIA----RNFHSLPTSITNKDWHIVPILNPDGYE 669
++H E I ++ A+ + N + + + HI+P +NPDG+E
Sbjct: 97 IGNMHGNEPIGRELLLRFAETLCNGAINNDKEIVQLLNSTSIHILPSMNPDGFE 150
>Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical
protein T27A8.1 protein.
Length = 492
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Frame = +1
Query: 391 IDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLD----ASIHSREWISTA 558
I L R +P + + GQSV+GR++ +L +S + + + A++H E
Sbjct: 68 IHNLHRKFPNLTHIYSAGQSVQGRELWVLVVSRYPIEHRKLIPEFKYVANMHGNEVTGRV 127
Query: 559 VVTYIADYIARNFHS---LPTSITNKDWHIVPILNPDGYEY 672
+ +A + N++S + + + H++P +NPDGYE+
Sbjct: 128 FLVSLAHTLLENYNSNLWIRQLVDSTRIHLMPSMNPDGYEH 168
>AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical
protein F56H1.5 protein.
Length = 1015
Score = 35.9 bits (79), Expect = 0.028
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Frame = +1
Query: 424 CTVSVIGQSVEGRDIKMLKISN-----SDARNSAIWLDASIHSRE----WISTAVVTYIA 576
C VIG S+ G IKML I+ A I L A +H E WI ++ +
Sbjct: 751 CREDVIGHSLAGNPIKMLTITTPASAAEIAAREVIVLSARVHPGETNASWIMQGILENLL 810
Query: 577 DYIARNFHSLPTSITNKDWHIVPILNPDG 663
+ + L S K IVP++NPDG
Sbjct: 811 CRQSNEMYRLRESFIFK---IVPMINPDG 836
>U23484-1|AAC46766.2| 459|Caenorhabditis elegans Hypothetical
protein EEED8.6 protein.
Length = 459
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Frame = +1
Query: 388 FIDELE-RDYPAICTVSVIGQSVEGRDIKMLKISNS----DARNSAIWLDASIHSREWIS 552
+++ELE R YP ++ Q+V+ R + ++ I + I+L A +H E S
Sbjct: 152 WLNELESRKYPFFHR-DLLVQTVQKRRVDLITIDATPDTFQGSKKMIFLTARVHPGESPS 210
Query: 553 TAVVTYIADYIARNFHSLPTSITNKDWHIVPILNPDG 663
+ V+ I +++ + I+P+LNPDG
Sbjct: 211 SHVMHGIIEFLVSKDDRAQKLRKVYCFKIIPMLNPDG 247
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 258 KENKTRHSHTKRIKTNCSNE*TKEKKSKINELEEIPQTERD 380
K+ K + S +K K S + K+KKSK PQT D
Sbjct: 257 KKKKNKKSKSKDKKKTASKKNKKKKKSKGESASSTPQTPND 297
>Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical
protein W08D2.5 protein.
Length = 1256
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 307 VPTNKPKKRKVKLMNWKKYHRLNVIYAFIDELERD 411
+PT + RKV + W Y +L Y +ID+L D
Sbjct: 85 IPTENGEMRKVPELRWFVYRKLE--YVWIDDLNSD 117
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 184 ISEHDVDLESNSTIWTENGTQ 246
I++ D L +NSTIW ENG +
Sbjct: 359 ITDSDGPLGANSTIWIENGNE 379
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 128 QSQRRVLQNYQTFCERPTVFPNTM*IWNPIPLYGLKTVLKLSSERKQNQAQSYQED 295
Q ++RV+ ++ F E V+P I N GL + K SE + NQ +ED
Sbjct: 634 QFKQRVMCVFRNF-EEMAVYPTDKLIHNQNVFLGLIEIGKEKSEERDNQKLEEEED 688
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,429,536
Number of Sequences: 27780
Number of extensions: 317264
Number of successful extensions: 967
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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