Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12a23
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23521-7|AAC46811.2| 141|Caenorhabditis elegans Hypothetical pr... 129 2e-30
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 33 0.15
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z81489-2|CAB04011.2| 360|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 28 5.6
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 28 5.6
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 28 5.6
Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical p... 28 7.4
U64847-8|AAQ91904.1| 558|Caenorhabditis elegans Acyltransferase... 28 7.4
U64847-7|AAB04876.1| 718|Caenorhabditis elegans Acyltransferase... 28 7.4
U40952-1|AAK68681.3| 436|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A serine... 28 7.4
Z50874-10|CAA90770.1| 302|Caenorhabditis elegans Hypothetical p... 27 9.8
Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical p... 27 9.8
Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z19152-5|CAA79541.1| 698|Caenorhabditis elegans Hypothetical pr... 27 9.8
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 27 9.8
AF241656-1|AAG36873.1| 698|Caenorhabditis elegans SR protein sp... 27 9.8
>U23521-7|AAC46811.2| 141|Caenorhabditis elegans Hypothetical
protein F41C3.4 protein.
Length = 141
Score = 129 bits (311), Expect = 2e-30
Identities = 60/130 (46%), Positives = 84/130 (64%)
Frame = +2
Query: 65 EITDTQKIGVGLAXXXXXXXXXXXXXXXXXXXXAIGNILFISGLTCVIGIQRTFFFFFQR 244
E++ T++IGVGL AIGN+LFI G+T +IG+QRT FFF+
Sbjct: 5 EVSTTKQIGVGLTTFGFFFIFLGVLMFLDSALLAIGNLLFIVGITFIIGVQRTLVFFFEF 64
Query: 245 HKLKASVAFFSGITIVLLGWPMIGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLNLP 424
KLK S+ FF GI +VL G+P+ GMIAE +GF++LF GFLP +N LR +P + ++ LP
Sbjct: 65 RKLKGSILFFGGILVVLFGYPLFGMIAECWGFIVLFGGFLPGIVNLLRSIPGISTITYLP 124
Query: 425 IIRGIVDRIA 454
IR ++DR+A
Sbjct: 125 GIRQVLDRLA 134
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -2
Query: 180 RILPMARRPLSNNRSTPRNR-NVIPKPARPTP-IFCVS 73
R+ + RRP +N R PR R N+I RPTP +F V+
Sbjct: 139 RLQTVTRRPFANRRPAPRQRTNIIRPTIRPTPRVFTVT 176
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -2
Query: 180 RILPMARRPLSNNRSTPRNR-NVIPKPARPTP-IFCVS 73
R+ + RRP +N R PR R N+I RPTP +F V+
Sbjct: 280 RLQTVTRRPFANRRPAPRQRTNIIRPTIRPTPRVFTVT 317
>Z81489-2|CAB04011.2| 360|Caenorhabditis elegans Hypothetical
protein C55A1.3 protein.
Length = 360
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 260 SVAFFSGITIVLLGWPM-IGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLNLPIIR 433
++ F + I ++L+ P +G + M+G +LF G LP+ FL P+L L N IIR
Sbjct: 263 ALVFQTLIPVILMHIPASLGFLFSMFGQSILFFGELPTFSVFL--YPILDPLPNFFIIR 319
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
F54B3.1b protein.
Length = 3394
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 135 TPRNRNVIPKPARPTPIFC 79
TP NRNV P+ A P FC
Sbjct: 1252 TPNNRNVFPEEATTFPSFC 1270
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1a protein.
Length = 3396
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 135 TPRNRNVIPKPARPTPIFC 79
TP NRNV P+ A P FC
Sbjct: 1252 TPNNRNVFPEEATTFPSFC 1270
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 336 ASCCCSEDSCLLPLIS 383
+ CCCS D+CL P +S
Sbjct: 1660 SGCCCSTDACLDPTVS 1675
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 336 ASCCCSEDSCLLPLIS 383
+ CCCS D+CL P +S
Sbjct: 1660 SGCCCSTDACLDPTVS 1675
>Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical
protein F35G12.3a protein.
Length = 1077
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -1
Query: 277 TEEGDGRLQLVPLEEEEKRPLDADHTCQTTYEQDIANG*ETFIEQQKYSE 128
T+E D R L +EEEK +D QT ++ I N ++ I++Q+ ++
Sbjct: 655 TDEDDERQLLSETDEEEKYEIDEKEEIQTKKDETI-NEEDSEIDEQRMND 703
>U64847-8|AAQ91904.1| 558|Caenorhabditis elegans
Acyltransferase-like protein 6,isoform b protein.
Length = 558
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -2
Query: 318 IPIMGQPSSTIVIPLKKATDAFSLCRWKKKKNVLWMPITHVRPLMNRIL 172
+ I+ +PS T + + DA SLC W + + + P +R L++ +L
Sbjct: 357 LTIVSRPSGTKLSIDQIVEDALSLCDWLQFEFMFCRPCDSLRELVHNVL 405
>U64847-7|AAB04876.1| 718|Caenorhabditis elegans
Acyltransferase-like protein 6,isoform a protein.
Length = 718
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -2
Query: 318 IPIMGQPSSTIVIPLKKATDAFSLCRWKKKKNVLWMPITHVRPLMNRIL 172
+ I+ +PS T + + DA SLC W + + + P +R L++ +L
Sbjct: 517 LTIVSRPSGTKLSIDQIVEDALSLCDWLQFEFMFCRPCDSLRELVHNVL 565
>U40952-1|AAK68681.3| 436|Caenorhabditis elegans Hypothetical
protein C03B1.13 protein.
Length = 436
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = -3
Query: 605 LFINFTLTRTQSSIFNILNTI*SFSFIYTKKNVSMLAFGT 486
L++ T R+ I N+LN+ +FS I+TKK+++ +GT
Sbjct: 392 LYLPETKGRSSEEIQNMLNST-TFSGIHTKKHINEDLYGT 430
>AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A
serine/threonine kinase protein.
Length = 1077
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -1
Query: 277 TEEGDGRLQLVPLEEEEKRPLDADHTCQTTYEQDIANG*ETFIEQQKYSE 128
T+E D R L +EEEK +D QT ++ I N ++ I++Q+ ++
Sbjct: 655 TDEDDERQLLSETDEEEKYEIDEKEEIQTKKDETI-NEEDSEIDEQRMND 703
>Z50874-10|CAA90770.1| 302|Caenorhabditis elegans Hypothetical
protein R10E4.11 protein.
Length = 302
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 251 ACAVGRRRKTSSGCRSHMSD 192
AC+ G+R KT S C H+ D
Sbjct: 151 ACSCGKRLKTHSDCHKHIFD 170
>Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical
protein B0464.5a protein.
Length = 1003
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 259 VRRLLQWDHYSTARLAHDRDDSRDVRLLAV 348
V R L W H+ST LA D D R V + V
Sbjct: 424 VIRKLGWGHFSTVWLAWDTQDKRFVAMKIV 453
>Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical
protein B0464.5c protein.
Length = 774
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 259 VRRLLQWDHYSTARLAHDRDDSRDVRLLAV 348
V R L W H+ST LA D D R V + V
Sbjct: 136 VIRKLGWGHFSTVWLAWDTQDKRFVAMKIV 165
>Z19152-5|CAA79541.1| 698|Caenorhabditis elegans Hypothetical
protein B0464.5b protein.
Length = 698
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 259 VRRLLQWDHYSTARLAHDRDDSRDVRLLAV 348
V R L W H+ST LA D D R V + V
Sbjct: 136 VIRKLGWGHFSTVWLAWDTQDKRFVAMKIV 165
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 648 THSFLFSQHDFFSLSFHKFYTHTDTIINIQY 556
TH+FL+ + +SF+ F T D +IN Y
Sbjct: 622 THNFLYCEFVTEFISFYDFNTDPDQLINAVY 652
>AF241656-1|AAG36873.1| 698|Caenorhabditis elegans SR protein
specfic kinase SPK-1 protein.
Length = 698
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 259 VRRLLQWDHYSTARLAHDRDDSRDVRLLAV 348
V R L W H+ST LA D D R V + V
Sbjct: 136 VIRKLGWGHFSTVWLAWDTQDKRFVAMKIV 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,643,234
Number of Sequences: 27780
Number of extensions: 337633
Number of successful extensions: 1221
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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