Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12a23
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   0.52 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    25   0.52 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.52 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    24   1.2  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    24   1.6  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   2.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.7  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = -2

Query: 423 GRFSSDPKTGTILKKLMAEG----RNPLNNSKKPYI 328
           G F + P  GTILKKL  +     R  +N+  +PY+
Sbjct: 250 GNFRAGPTPGTILKKLCPQEEACFRLLMNDILRPYV 285


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = -2

Query: 423 GRFSSDPKTGTILKKLMAEG----RNPLNNSKKPYI 328
           G F + P  GTILKKL  +     R  +N+  +PY+
Sbjct: 165 GNFRAGPTPGTILKKLCPQEEACFRLLMNDILRPYV 200


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = -2

Query: 423 GRFSSDPKTGTILKKLMAEG----RNPLNNSKKPYI 328
           G F + P  GTILKKL  +     R  +N+  +PY+
Sbjct: 484 GNFRAGPTPGTILKKLCPQEEACFRLLMNDILRPYV 519


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 269 RRRTPSACAVGRRRKTSSGCRSHMSD 192
           +RR+ S C++G    TSS   S  SD
Sbjct: 169 KRRSVSECSLGTASSTSSTASSRNSD 194


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = +3

Query: 633 IKMNVLLYFSIVAFLNV 683
           +K+ +LL+F+I+A +NV
Sbjct: 1   MKIKILLFFTILALINV 17


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 480 DSSAECEHRDIFLCINKTKTLNSV 551
           D++   +   IF CI K KT+N +
Sbjct: 109 DTNVHLKITKIFQCITKFKTINDI 132


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 292 YYSDPTEEGDGRLQLVPLEE 233
           +Y  P+ +GDG+  L+P  E
Sbjct: 173 FYIYPSLQGDGKFHLLPTGE 192



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 657  NTITHSFLFSQH 622
            NT+ HSF++ +H
Sbjct: 1734 NTLLHSFMYHEH 1745


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 292 YYSDPTEEGDGRLQLVPLEE 233
           +Y  P+ +GDG+  L+P  E
Sbjct: 173 FYIYPSLQGDGKFHLLPTGE 192



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 657  NTITHSFLFSQH 622
            NT+ HSF++ +H
Sbjct: 1730 NTLLHSFMYHEH 1741


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,279
Number of Sequences: 438
Number of extensions: 4822
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)