Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12a21
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   1.8  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.4  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.2  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   5.6  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   7.4  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = -3

Query: 617 FGSILKAASLRPATSMMTAAPRDPQGSP----SASARVCRDALASSSAGT 480
           FG    +ASLR + +   A  R   GSP    S+S+R       SSS+GT
Sbjct: 13  FGKRSSSASLRSSAANFAAWLRGNSGSPLSSISSSSRNSSSCNNSSSSGT 62


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse
          transcriptase protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 81 SRNHRASSLALGSLYDPPN 25
          +R HRA  L L  ++ PPN
Sbjct: 25 AREHRADVLILSDMFTPPN 43


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +3

Query: 456 RARHRGGLSAGGAAREGVAADPRASGGR 539
           R R RGG   GG    G   D    GGR
Sbjct: 81  RGRGRGGRDGGGGFGGGGYGDRNGDGGR 108


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse
          transcriptase protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 81 SRNHRASSLALGSLYDPP 28
          +R HRA  L L  +Y PP
Sbjct: 45 AREHRADVLLLSDIYRPP 62


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 17/60 (28%), Positives = 22/60 (36%)
 Frame = +3

Query: 420  ARERTTSGQRSQRARHRGGLSAGGAAREGVAADPRASGGRALWVPGRSRHHRRRGTKTSS 599
            A  R  SG RS+        S  G+A+   +     SGG       RSR       K+ S
Sbjct: 1087 AGSRAGSGSRSRSRSRSRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAGSRKSGS 1146


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,837
Number of Sequences: 2352
Number of extensions: 11422
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)