Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12a19
         (670 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49067-2|CAA88850.1|  283|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AL117207-13|CAB60393.2|  327|Caenorhabditis elegans Hypothetical...    30   1.7  
AB038505-1|BAB11970.1|  283|Caenorhabditis elegans galectin LEC-...    30   1.7  
Z74041-9|CAA98523.2|  801|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z74035-5|CAA98485.2|  801|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AF024499-6|AAB70354.1|  560|Caenorhabditis elegans Hypothetical ...    28   5.2  
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ...    28   6.9  
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut...    28   6.9  
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical...    28   6.9  
AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z49067-2|CAA88850.1|  283|Caenorhabditis elegans Hypothetical
           protein C44F1.3 protein.
          Length = 283

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 20/52 (38%), Positives = 26/52 (50%)
 Frame = -3

Query: 368 QPFIFFTNLIKKFYIYVRN*KRNGAQRTCDTESAQFNKKDVIFEINIVNLDF 213
           Q  +F  N   K    VRN  RNG   T + E     KKDV F++ IVN ++
Sbjct: 189 QDILFHFNPRIKDKAVVRNSHRNGFWDTEEREGGFPFKKDVGFDLTIVNEEY 240


>AL117207-13|CAB60393.2|  327|Caenorhabditis elegans Hypothetical
           protein Y60A3A.4 protein.
          Length = 327

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +2

Query: 173 AYLVLKVQECFVNKNPN*LCLSR-K*HLFC-*IVLILYHKCAVRHCVFSYVHIYKI 334
           AY+V  +Q  + N+  N LC++    H  C  +V+I+ HK   R   FS +H+  +
Sbjct: 254 AYIVFAIQYDYYNQGANNLCMAAITFHGVCTTLVMIIVHK-PYRQATFSILHLKSV 308


>AB038505-1|BAB11970.1|  283|Caenorhabditis elegans galectin LEC-4
           protein.
          Length = 283

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 20/52 (38%), Positives = 26/52 (50%)
 Frame = -3

Query: 368 QPFIFFTNLIKKFYIYVRN*KRNGAQRTCDTESAQFNKKDVIFEINIVNLDF 213
           Q  +F  N   K    VRN  RNG   T + E     KKDV F++ IVN ++
Sbjct: 189 QDILFHFNPRIKDKAVVRNSHRNGFWDTEEREGGFPFKKDVGFDLTIVNEEY 240


>Z74041-9|CAA98523.2|  801|Caenorhabditis elegans Hypothetical
           protein F47G9.3 protein.
          Length = 801

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -3

Query: 290 RTCDTESAQFNKKDVIFEINIVNLDFYSRNIPELLKLDTLYFGPS 156
           +T +  + QFNK D+  ++N+  +    R   E++K  T+  G S
Sbjct: 580 KTMNLRTTQFNKLDIYGKVNVKPMSMELRGKREIIKARTVKLGQS 624


>Z74035-5|CAA98485.2|  801|Caenorhabditis elegans Hypothetical
           protein F47G9.3 protein.
          Length = 801

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -3

Query: 290 RTCDTESAQFNKKDVIFEINIVNLDFYSRNIPELLKLDTLYFGPS 156
           +T +  + QFNK D+  ++N+  +    R   E++K  T+  G S
Sbjct: 580 KTMNLRTTQFNKLDIYGKVNVKPMSMELRGKREIIKARTVKLGQS 624


>Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical protein
            K04D7.5b protein.
          Length = 1287

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 368  VRIEYLL-LRRLISKNKLKEPNFSSYFNYIQ 457
            V IE ++ + R I+  KLKEP+    F YIQ
Sbjct: 1125 VAIEMIMDIERYITAAKLKEPSLKGLFRYIQ 1155


>Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical protein
            K04D7.5a protein.
          Length = 1338

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 368  VRIEYLL-LRRLISKNKLKEPNFSSYFNYIQ 457
            V IE ++ + R I+  KLKEP+    F YIQ
Sbjct: 1125 VAIEMIMDIERYITAAKLKEPSLKGLFRYIQ 1155


>AF024499-6|AAB70354.1|  560|Caenorhabditis elegans Hypothetical
           protein F42G2.2 protein.
          Length = 560

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 299 HCVFSYVHIYKISLLDL*RK*MVVRIEYLLLRRLISKNKLKEPN 430
           HC  +Y+ ++KIS  D+ +K + V       RR+I K K  EP+
Sbjct: 209 HCESAYIEVWKISADDI-QKLIKVDFHAQDFRRIIVKYKSLEPD 251


>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
            protein.
          Length = 1497

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 398  LISKNKLKEPNFSSYFNYIQKNH 466
            L +KN    PNF ++F +IQ  H
Sbjct: 1432 LHAKNHFGRPNFKAFFQFIQSEH 1454


>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cuticle
            protein 3 protein.
          Length = 1497

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 398  LISKNKLKEPNFSSYFNYIQKNH 466
            L +KN    PNF ++F +IQ  H
Sbjct: 1432 LHAKNHFGRPNFKAFFQFIQSEH 1454


>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
            protein F53G12.3 protein.
          Length = 1503

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 398  LISKNKLKEPNFSSYFNYIQKNH 466
            L +KN    PNF ++F +IQ  H
Sbjct: 1438 LHAKNHFGRPNFKAFFQFIQSEH 1460


>AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical
           protein Y97E10B.1 protein.
          Length = 588

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = +2

Query: 389 LRRLISKNKLKE-----PNFSSYFNYIQKNHNSIYIKFHF 493
           LRR++ K KL+E     PN   + + I K +N  Y ++H+
Sbjct: 489 LRRMMRKPKLREIFKNLPNIHYFTDLIVKCYNDRYYRYHY 528


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,085,041
Number of Sequences: 27780
Number of extensions: 247137
Number of successful extensions: 555
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)