Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12a16
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73425-3|CAA97785.1|  451|Caenorhabditis elegans Hypothetical pr...    61   8e-10
AC024779-4|AAK68484.1|  439|Caenorhabditis elegans Hypothetical ...    30   1.8  
Z72513-3|CAA96671.2|  127|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z74474-1|CAA98954.2|  566|Caenorhabditis elegans Hypothetical pr...    28   5.5  
U41263-12|AAO38594.1|  422|Caenorhabditis elegans Hypothetical p...    28   5.5  
U41263-11|AAO38595.1|  516|Caenorhabditis elegans Hypothetical p...    28   5.5  
U41263-10|AAO38593.1|  610|Caenorhabditis elegans Hypothetical p...    28   5.5  
U23081-1|AAA79846.1|  247|Caenorhabditis elegans triosephosphate...    27   9.7  
AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical...    27   9.7  
AL023828-10|CAA19447.1|  247|Caenorhabditis elegans Hypothetical...    27   9.7  
AF068720-2|AAC17787.1|  346|Caenorhabditis elegans Seven tm rece...    27   9.7  

>Z73425-3|CAA97785.1|  451|Caenorhabditis elegans Hypothetical
           protein F12F6.7 protein.
          Length = 451

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
 Frame = +1

Query: 124 IVDYTDSSTRFYEAPRD----FSKQYAHIYSARLCTFR-NILTPLIKNKWSNKYKILKLC 288
           I++Y + S R+    +D    F++QY  +Y ARL   +  IL    +     K+   +L 
Sbjct: 8   ILNYKNVSDRYILTEKDKKGAFTRQYFEVYEARLKELKPRILENAEREIGKGKFTHSQLS 67

Query: 289 DLRESGTSCVIIGTLFKLQELKPSILKELSDQLEIIPQPTRTHFVHDS---------DSL 441
           D ++      ++G + K    +PSILK L ++ ++           D          D +
Sbjct: 68  DAKQD-EEIFVVGVIVKRIAARPSILKSLLNEDKVAYDDYEEDAEEDEVKRYAGSIEDRI 126

Query: 442 VLEDELQRIKLVSDVIDIHQVVTGVVCAILGSEDEDGIFTVKDVCWPGCSIQKPLPVRNE 621
            LE + Q ++L  + I + +  TG    +LG   ++G+F V  + WP   + K + V   
Sbjct: 127 ELESDKQTVRLEGN-ISMDECATGCCVGVLGKLGKEGVFHVNRLVWPSVKVPKKVAV--- 182

Query: 622 DRYIVLMSGLNMASKSADQILSL 690
           D  I  +SGL++     D  L++
Sbjct: 183 DGTIAFVSGLDLTGDLEDDRLTI 205


>AC024779-4|AAK68484.1|  439|Caenorhabditis elegans Hypothetical
           protein Y43B11AL.1 protein.
          Length = 439

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 337 KLQELKPSILKELSDQLEIIPQPTRTHFVHDSDSLVLEDE 456
           ++ ELK  IL E+    E   Q T  +F H SDS + + E
Sbjct: 355 RITELKEQILVEIDAYTEAKTQQTNPYFTHISDSFMNDTE 394


>Z72513-3|CAA96671.2|  127|Caenorhabditis elegans Hypothetical
           protein T04F3.4 protein.
          Length = 127

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 379 DQLEIIPQPTRTHFVHDSDSLV-LEDELQRIKLVSDVID 492
           D +EI+   T TH  HDS   V + DE +  +LV  V+D
Sbjct: 70  DGIEILKALTHTHDAHDSGHPVPVSDEAETERLVDAVLD 108


>Z74474-1|CAA98954.2|  566|Caenorhabditis elegans Hypothetical
           protein K10C8.1 protein.
          Length = 566

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -3

Query: 376 KALSECLVSILAV*TVFQL*HKRYRFHVNHKALKSCIYLTTYFLS 242
           +A + C  S+  V  + Q+ H   +  V H +L   +Y+  YF S
Sbjct: 249 RARARCSESVKGVSAILQVVHMTGKLVVGHNSLLDAMYMYHYFFS 293


>U41263-12|AAO38594.1|  422|Caenorhabditis elegans Hypothetical
           protein T19D12.2b protein.
          Length = 422

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 626 LSSFLTGSGFCILQPGQQTSLTVNIPSSSSDPKIAHTTPVTT 501
           LS   +G+GF      QQ +  + +  +SS P +    PVTT
Sbjct: 144 LSPLSSGTGFSFTGDTQQVADQIGLKMASSSPSVYCPPPVTT 185


>U41263-11|AAO38595.1|  516|Caenorhabditis elegans Hypothetical
           protein T19D12.2c protein.
          Length = 516

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 626 LSSFLTGSGFCILQPGQQTSLTVNIPSSSSDPKIAHTTPVTT 501
           LS   +G+GF      QQ +  + +  +SS P +    PVTT
Sbjct: 144 LSPLSSGTGFSFTGDTQQVADQIGLKMASSSPSVYCPPPVTT 185


>U41263-10|AAO38593.1|  610|Caenorhabditis elegans Hypothetical
           protein T19D12.2a protein.
          Length = 610

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 626 LSSFLTGSGFCILQPGQQTSLTVNIPSSSSDPKIAHTTPVTT 501
           LS   +G+GF      QQ +  + +  +SS P +    PVTT
Sbjct: 144 LSPLSSGTGFSFTGDTQQVADQIGLKMASSSPSVYCPPPVTT 185


>U23081-1|AAA79846.1|  247|Caenorhabditis elegans triosephosphate
           isomerase protein.
          Length = 247

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/42 (26%), Positives = 24/42 (57%)
 Frame = +1

Query: 346 ELKPSILKELSDQLEIIPQPTRTHFVHDSDSLVLEDELQRIK 471
           E+ P+++K+L  +  I+    R H   +SD+L+ E  +  ++
Sbjct: 76  EISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALE 117


>AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical
           protein Y75B8A.24 protein.
          Length = 2121

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 337 KLQELKPSILKELSDQLEIIPQPTRTHFVH 426
           +LQE++ ++L ELS Q E +P   R  F +
Sbjct: 838 ELQEMRNTVLAELSHQAEAVPLINRFDFAN 867


>AL023828-10|CAA19447.1|  247|Caenorhabditis elegans Hypothetical
           protein Y17G7B.7 protein.
          Length = 247

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/42 (26%), Positives = 24/42 (57%)
 Frame = +1

Query: 346 ELKPSILKELSDQLEIIPQPTRTHFVHDSDSLVLEDELQRIK 471
           E+ P+++K+L  +  I+    R H   +SD+L+ E  +  ++
Sbjct: 76  EISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALE 117


>AF068720-2|AAC17787.1|  346|Caenorhabditis elegans Seven tm
           receptor protein 240 protein.
          Length = 346

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 368 FRMLGFNSCSLNSVPIITQEVPLSRKSQSFKIL 270
           FR   F  C+   +  + QE P++  SQS KI+
Sbjct: 311 FRNALFKPCTRKKIYAVQQETPIATTSQSVKIV 343


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,355,197
Number of Sequences: 27780
Number of extensions: 319444
Number of successful extensions: 957
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)