Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12a08
         (644 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0E8X7 Cluster: CG30415-PA, isoform A; n=7; Endopterygo...    83   6e-15
UniRef50_Q09JI6 Cluster: Conserved arthropod protein; n=2; Ixodo...    58   2e-07
UniRef50_UPI0000515741 Cluster: PREDICTED: similar to CG30415-PA...    54   3e-06
UniRef50_Q9I4V5 Cluster: Cis,cis-muconate transporter MucK; n=8;...    35   1.5  
UniRef50_A0V2R2 Cluster: Glycoside hydrolase, family 3-like; n=1...    33   5.9  
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt...    33   5.9  

>UniRef50_Q0E8X7 Cluster: CG30415-PA, isoform A; n=7;
           Endopterygota|Rep: CG30415-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 82

 Score = 83.0 bits (196), Expect = 6e-15
 Identities = 39/74 (52%), Positives = 49/74 (66%)
 Frame = +2

Query: 170 SGRHMKYPYTLSAKIAQFPLFYYMKNNIIWMYYPLGILTGFYFFMKIHVIVNSDENKRSW 349
           +GR M+YPYT SAKIAQFP+ +Y+KN  IW YY +  +     F KI  + NS ENK++W
Sbjct: 11  AGRPMRYPYTFSAKIAQFPIKHYIKNQWIWRYYFIAAVACVPVFYKISKLANSPENKKAW 70

Query: 350 AESQRKIAEKEAHH 391
           AESQ K  E   HH
Sbjct: 71  AESQAK--EHAEHH 82


>UniRef50_Q09JI6 Cluster: Conserved arthropod protein; n=2;
           Ixodoidea|Rep: Conserved arthropod protein - Argas
           monolakensis
          Length = 102

 Score = 57.6 bits (133), Expect = 2e-07
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +2

Query: 146 AAGVIAGKSGRHMKYPYTLSAKIAQFPLFYYMKNNIIWMY-YPLGILTGFYFFMKIHVIV 322
           A+G  +  + R MKYPYT +AK+A FP  +  +N  +  Y  P  ILT  ++ + +H  V
Sbjct: 18  ASGTASSSTSRRMKYPYTWTAKVALFPHRFMFENVWLIRYSIPAIILTFIFYVVPVHRAV 77

Query: 323 NSDENKRSWAESQRKIAEKEAHH 391
           NS     +  E  RK AE EA H
Sbjct: 78  NSPSAIAAHEEFMRKQAEAEAEH 100


>UniRef50_UPI0000515741 Cluster: PREDICTED: similar to CG30415-PA,
           isoform A; n=2; Apocrita|Rep: PREDICTED: similar to
           CG30415-PA, isoform A - Apis mellifera
          Length = 78

 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
 Frame = +2

Query: 170 SGRHMKYPYTLSAKIAQFPL-FYYMKNNIIWM--YYPLGILTGFYFFMKIHVIVNSDENK 340
           SGR MK+PYT++AKI +FP   Y++K+   W+  Y+ + IL     + K   + ++ EN 
Sbjct: 2   SGRPMKFPYTIAAKITRFPFHHYFVKSETGWVFRYWAISILICAPLWYKFQQLSHNPENV 61

Query: 341 RSWAESQRKIAEKEAHH 391
           + W E  +     E HH
Sbjct: 62  KKWDEIHKHQFSGEMHH 78


>UniRef50_Q9I4V5 Cluster: Cis,cis-muconate transporter MucK; n=8;
           Pseudomonas aeruginosa|Rep: Cis,cis-muconate transporter
           MucK - Pseudomonas aeruginosa
          Length = 451

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +2

Query: 107 LVGIYVNMEKSLRAAGVIAGKSGRHMKYPYTLSAKIAQFPL--FYYMKNNIIWMYYPLGI 280
           +VG Y  M     AAGV A   GR + +        A  PL  FY+  +NI+W+    G 
Sbjct: 280 MVGTYSAMILGKVAAGVCADLFGRRLTFAAGAIGSAAFMPLIVFYHSPSNILWILITFGF 339

Query: 281 LTG 289
           + G
Sbjct: 340 IYG 342


>UniRef50_A0V2R2 Cluster: Glycoside hydrolase, family 3-like; n=1;
           Clostridium cellulolyticum H10|Rep: Glycoside hydrolase,
           family 3-like - Clostridium cellulolyticum H10
          Length = 724

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +2

Query: 92  MVSKVLVGIYVNMEKSLRAAGVIAGKSGRHMKYPYTLSAKIAQFPLFYYMKNNIIWMYY 268
           +   +L+  Y  ME     A ++ GK+    K P T+ A   Q P F     +I + YY
Sbjct: 527 LAKAILIQWYPGMEGGTALANILFGKANPSAKLPITVPATPQQLPYFDMNATSIAYDYY 585


>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
           Cytochrome b - Agamermis sp. BH-2006
          Length = 388

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = +2

Query: 155 VIAGKSGRHMKYPYTLSAKIAQFPLFYYMKNNIIWMYYPLGILTGFYFFMKIHVIVNSDE 334
           ++    G  ++YPY + ++I  F   Y++   +I+M+  L  + G YF    H+  +S  
Sbjct: 325 ILVWLGGMPVEYPYLILSQILTF--IYFLNFLLIYMFNYLNFILGMYFIYSEHLKSHSKY 382

Query: 335 N 337
           N
Sbjct: 383 N 383


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,501,684
Number of Sequences: 1657284
Number of extensions: 11366530
Number of successful extensions: 22885
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22881
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)