Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12a06
(676 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.17c ||SPCC285.02c|DUF292 family protein|Schizosaccharom... 35 0.009
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 35 0.009
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 32 0.066
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.087
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.61
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.1
SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|c... 28 1.4
SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|ch... 28 1.4
SPAC1F12.08 |||cytidylyltransferase |Schizosaccharomyces pombe|c... 28 1.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 1.9
SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyc... 27 1.9
SPCC622.07 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 27 1.9
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 3.3
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 27 3.3
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 26 4.3
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 4.3
SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion transporter|... 26 5.7
SPBC2D10.15c |||peptidyl-tRNA hydrolase Pth1 |Schizosaccharomyce... 26 5.7
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 7.6
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 25 7.6
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 25 7.6
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 25 10.0
>SPCC1442.17c ||SPCC285.02c|DUF292 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 271
Score = 35.1 bits (77), Expect = 0.009
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +3
Query: 282 KVVFDDLYGDEVVGAVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANAD-E 458
++++ + DE+V A KE+I+TY ND P+ N DI + E + L+++ + E
Sbjct: 141 QLLYPPIPKDELVEAYRKELIRTYFPND----YPKEANKDIPSSAEADTMLNLESSENRE 196
Query: 459 LDLKLEESNGQNSKEML-APLPELSK 533
L+E N Q E + L +SK
Sbjct: 197 QPTSLKEENTQEDDEKVNGNLANISK 222
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 35.1 bits (77), Expect = 0.009
Identities = 32/121 (26%), Positives = 57/121 (47%)
Frame = -1
Query: 640 SALLITSEVTLVPSAFSLGDITSPSFLSADSSSTSHLDNSGKGANIXXXXXXXXXXXXXX 461
++L I+S T S FS +SPS +S+ SS+S + +S +
Sbjct: 590 TSLSISSSST--SSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSS 647
Query: 460 XXXXLACNSIPSKGSSLVTMSELLVSGTDSLTSFLT*VCIISLSTAPTTSSPYKSSNTTL 281
+ ++IP SSL T S ++ + +L S + + + S A ++SSP SS++ +
Sbjct: 648 SILSSSISTIPIS-SSLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSSSSPIPSSSSLV 706
Query: 280 S 278
S
Sbjct: 707 S 707
Score = 29.5 bits (63), Expect = 0.46
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Frame = -1
Query: 607 VPSAFSLGDITSPSFLSADSSSTSHLDNSGKGANIXXXXXXXXXXXXXXXXXXLACNSIP 428
+PS FS S S+ SS++ + +S + S P
Sbjct: 569 IPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSP 628
Query: 427 SKG-SSLVTMSELLVSGTDSLTSFLT*VCIISLSTAPTTSSPYKSSNTTLSFCS 269
+ SSL+ S ++SG+ S+ S IS S + +SS SS+T +S S
Sbjct: 629 TPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLVSSSS 682
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 32.3 bits (70), Expect = 0.066
Identities = 22/89 (24%), Positives = 45/89 (50%)
Frame = +3
Query: 375 SVPETNNSDIVTKEEPFDGIELQANADELDLKLEESNGQNSKEMLAPLPELSKWEVDDES 554
++PE +S + + + E ++ +E+D S+ + +E A + EL+ E D E
Sbjct: 125 NIPEEEDSSDLENDFLYGADEFSSDEEEMDDISVTSSEEEEEENGARIEELNSDEEDAEQ 184
Query: 555 ADKKEGEVMSPKEKADGTKVTSDVIKRAE 641
A+++ E PK++ K + D +K+ E
Sbjct: 185 AEEEILEKPVPKDEV-AEKHSKDKLKKEE 212
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.9 bits (69), Expect = 0.087
Identities = 31/113 (27%), Positives = 51/113 (45%)
Frame = -1
Query: 607 VPSAFSLGDITSPSFLSADSSSTSHLDNSGKGANIXXXXXXXXXXXXXXXXXXLACNSIP 428
+PS S TS S S+ SSST+ +S ++I +S
Sbjct: 240 IPSTSSSSSSTSSSLSSSSSSSTA--SSSSSSSSI---ISSSSSSSSSPTSTSSTISSSS 294
Query: 427 SKGSSLVTMSELLVSGTDSLTSFLT*VCIISLSTAPTTSSPYKSSNTTLSFCS 269
S SS + S + S + S +SF + + S+S++ + SS SS++T+S S
Sbjct: 295 SSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSS 347
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 0.61
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Frame = -1
Query: 640 SALLITSEVTLVPSAFSLGDITSPSFLSADSSSTSHLDNSGKGANIXXXXXXXXXXXXXX 461
S+ ITS + PS+ S +SPS S+ SSS+S +S ++
Sbjct: 143 SSYFITSSSS-TPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSS 201
Query: 460 XXXXLACNSIP--SKGSSLVTMSELLVSGTDSLTSFLT*VCIISLSTAPTTSSPYKSSNT 287
++ P SK SS + S + S T + +S + I+S + +T +S+
Sbjct: 202 SSSSSKSSASPSSSKSSSKFSSSSFITSTTPASSS--SSGAIVSNAKTASTDDSSSASSA 259
Query: 286 TLSFCSV 266
T S SV
Sbjct: 260 TSSVSSV 266
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.3 bits (60), Expect = 1.1
Identities = 28/112 (25%), Positives = 49/112 (43%)
Frame = -1
Query: 604 PSAFSLGDITSPSFLSADSSSTSHLDNSGKGANIXXXXXXXXXXXXXXXXXXLACNSIPS 425
PS+ S TSPS S+ SSS+S +S ++ + +S S
Sbjct: 144 PSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 203
Query: 424 KGSSLVTMSELLVSGTDSLTSFLT*VCIISLSTAPTTSSPYKSSNTTLSFCS 269
SS+ S S + S +S + S S+ P++SS + ++ ++ +F S
Sbjct: 204 SSSSVPITSSTSSSHSSSSSSSSS----SSSSSRPSSSSSFITTMSSSTFIS 251
>SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 1.4
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Frame = +3
Query: 309 DEVVGAVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANADELDLKLEESNG 488
++ + VDK I ++ND++ES+P N I + E +L A+ +ELD L
Sbjct: 209 EKKISNVDKPI-SDLIENDIHESLPALQNPPIQSHSE----TDLYAD-EELDSILMHHE- 261
Query: 489 QNSKEMLAPLPELSKWEVDDESADKKEGEVMSPKEKADG-TKVT-SDVIK 632
P+PE + E +E ++ EG+ +K D K+T + V+K
Sbjct: 262 ------RPPIPESPRVEEFEELLNQFEGDEKVSVDKIDAHDKMTEAQVVK 305
>SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 388
Score = 27.9 bits (59), Expect = 1.4
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 330 DKEIIQTYVKNDVNESVPETN--NSDIVTKEEPFDGIELQANADELDLKLEESNGQNSKE 503
DKEI ++ + NE V E++ N+ ++ ++ D + L++ L + N N
Sbjct: 214 DKEINKSMSYSMKNEGVKESSLQNATLINRKSIIDD-------EMLEIPLGKHNNTNLPA 266
Query: 504 MLAPLPELSKWEVDDESADKKEGEVMSPKEK 596
+ A L E DDE +K+ EV PK K
Sbjct: 267 LTAGF--LDPVESDDEFVEKELEEVDIPKRK 295
>SPAC1F12.08 |||cytidylyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 329
Score = 27.9 bits (59), Expect = 1.4
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Frame = +3
Query: 300 LYGDEVVGA-VDKEIIQTYVKN--DVNE---SVPETNNSDIVTKEEPFDGIELQANADEL 461
+ GDE++ V KE ++ K +V+ S+ E N +VT +PF A D L
Sbjct: 204 ILGDELLKKKVQKEFLENIQKRKEEVSNFLHSIKEDINCRVVTIHDPFGPTITDAEIDSL 263
Query: 462 DLKLEESNGQNS---KEMLAPLPELSKWEVD 545
+ E G + + + LPELS + +D
Sbjct: 264 IVSEETKTGATAVQEERVKRGLPELSIYCID 294
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.5 bits (58), Expect = 1.9
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Frame = +3
Query: 330 DKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIE---LQANADEL----DLKLEESNG 488
++++++T K+ NE N SD+V+KE+ +E Q DE D+ +++
Sbjct: 4009 EEDLLETEQKS--NEQSAANNESDLVSKEDDNKALEDKDRQEKEDEEEMSDDVGIDDEIQ 4066
Query: 489 QNSKEMLAPLPELSKWEVD---DESADKKEGEVMSPKEKADGTKVTSDVIKRAENA 647
+ +E + P ++ +D D D+KEG+V + D +D K +A
Sbjct: 4067 PDIQENNSQPPPENEDHLDLPEDLKLDEKEGDVSKDSDLEDMDMEAADENKEEADA 4122
>SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 27.5 bits (58), Expect = 1.9
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +3
Query: 330 DKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANADELDLKLEESNGQNSKEML 509
D E +Q V + V+++ P N D+V +E + A E DLK + +
Sbjct: 361 DMESLQRMVIDFVSDTSPAGINLDLVKQEVQQGDLTYVLQAYEHDLKTPIRTAVSGNLVR 420
Query: 510 APLPELSKWEVDDESA 557
L +L K +VD E A
Sbjct: 421 TLLIQLQKTKVDVEVA 436
>SPCC622.07 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 128
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -3
Query: 425 KGLFLGHDVRVIGFRYRFVDIIFDVSLYYLFINSSHDFIAI*IIKHNFIFLFSFW 261
K L G VRV +Y+ + + +S+ +LF+N D + +K+ F F W
Sbjct: 12 KDLTYGECVRVAKEKYKIIHRLLYISIIFLFLNYVVDIVC--YVKNYNGFSFFCW 64
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 3.3
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Frame = -1
Query: 664 IAFAKIAFSALLITSEVTLVPSAFSLGDITSPSFLSAD--SSSTSHLDNSGKGANIXXXX 491
I + +A S++ +S + ++ SL ++ S SA SS+TS +S +N
Sbjct: 134 ITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSS 193
Query: 490 XXXXXXXXXXXXXXLACNSIPSKGSSLVTMSELLVSGTDSLTSFLT*VCIISLSTAPTTS 311
+S+ S +S S L S + + T+ T S+S+ ++S
Sbjct: 194 SLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSAT-ATSSSISSTVSSS 252
Query: 310 SPYKSSNTTLSFCS 269
+P SSN+T + S
Sbjct: 253 TPLTSSNSTTAATS 266
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 495 SKEMLAPLPELSKWEVDDESADKKEGEVMSPKEK 596
+KE P+P+ S E SA+ K+ V SP++K
Sbjct: 320 TKEPAKPVPQPSSNEPPAPSAENKQPSVSSPEKK 353
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 26.2 bits (55), Expect = 4.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 354 VKNDVNESVPETNNSDIV-TKEEPFDGIELQANADELDLKLEESNGQNSKEML 509
++ D E E N D + TK+E D + +DE KL+E N +N ++ML
Sbjct: 102 IQRDEAEQKAEIYNRDALNTKQEHLDIKKRLEKSDETVCKLKEEN-ENLQDML 153
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 4.3
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -1
Query: 436 SIPSKGSSLVTMSELLVSGTDSLTSFLT*VCIISLS----TAPTTSSPYKSSNTTLS 278
SIP G+S ++ V T S T T C S S + P TS+P ++N T S
Sbjct: 398 SIPPTGNSTTPVTPT-VPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTS 453
Score = 26.2 bits (55), Expect = 4.3
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 436 SIPSKGSSLVTMSELLVSGTD-SLTSFLT*VCIISLSTAPTTSSPYKSSNTTLS 278
S P ++ T + +L + T + T T C S S P TS+P SSN T+S
Sbjct: 524 STPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSV-PYTSTPVTSSNYTIS 576
Score = 25.4 bits (53), Expect = 7.6
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -1
Query: 436 SIPSKGSSLVTMSELLVSGTDSLTSFLT*VCIISLSTAPTTSSPYKSSNTTLS 278
S P ++ T + + + T ++ LT + ++ P TS+P SSN T+S
Sbjct: 465 STPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTIS 517
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -1
Query: 436 SIPSKGSSLVTMSELLVSGTDSLTSFLT*VCIISLSTAPTTSSPYKSSNTTLS 278
S P S+ S V+ T T+ T + ++ P TS+P ++N T S
Sbjct: 506 STPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTS 558
>SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 617
Score = 25.8 bits (54), Expect = 5.7
Identities = 12/45 (26%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +3
Query: 414 EEPFDGIEL-QANADELDLK-LEESNGQNSKEMLAPLPELSKWEV 542
+E + I L +++ +++ K E NG+N+++ +PL E+S + +
Sbjct: 106 DEDIENISLPESHPEDIQRKEFETENGKNTRDQPSPLAEVSDFAI 150
>SPBC2D10.15c |||peptidyl-tRNA hydrolase Pth1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 218
Score = 25.8 bits (54), Expect = 5.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 339 IIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANADELDLKL 473
++ T ND + + + +N D V K P D I DEL+L L
Sbjct: 78 VLSTSYMNDSGKQLKKISN-DFVRKVSPLDKIVYVVVHDELELDL 121
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.4 bits (53), Expect = 7.6
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -1
Query: 436 SIPSKGSSLVTMSELLVSGTDSLTSFLT*VCIISLSTAPTTSSPYKSSNTTLS 278
++PS SSLVT+ E S SL S LT S ST +TSS T+ S
Sbjct: 319 NLPSSSSSLVTIGE--SSFPSSLLSLLT----QSFSTVRSTSSSSTDQLTSAS 365
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 7.6
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 357 KNDVNESVPETNNSDIVTKEEPFDGI--ELQANADELDLKLEESNGQNSKEMLAPLPELS 530
KNDV ++V E NN + FD + +L A+ +E D+ ++ + + A L +
Sbjct: 254 KNDVQQNVIEENNESSDNEYATFDRVKKDLFASDEEDDVSADQLSSYERDK--ARLTQQI 311
Query: 531 KWEVDDESADKKEGEVM 581
+ E++ E+ KK +M
Sbjct: 312 R-ELEAENVAKKSWTMM 327
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 25.4 bits (53), Expect = 7.6
Identities = 24/79 (30%), Positives = 32/79 (40%)
Frame = +3
Query: 411 KEEPFDGIELQANADELDLKLEESNGQNSKEMLAPLPELSKWEVDDESADKKEGEVMSPK 590
KEE D +E N E +LE+++G S E E++DE S K
Sbjct: 447 KEEEEDPLERARNDAEKIRQLEKASGNASDE----------GELNDEEEVISSSNTPSTK 496
Query: 591 EKADGTKVTSDVIKRAENA 647
K + SDVI A A
Sbjct: 497 AKTTNKVIISDVIIEATQA 515
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 25.0 bits (52), Expect = 10.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 416 FLGHDVRVIGFRYRFVDIIFDVSLYYLFI 330
F+G + + F RFVD F VS Y + +
Sbjct: 505 FIGRVIGLAIFHRRFVDAFFVVSFYKMIL 533
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,874,245
Number of Sequences: 5004
Number of extensions: 36024
Number of successful extensions: 191
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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