Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12a06
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 33 0.25
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 33 0.25
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 33 0.25
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 33 0.25
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 33 0.25
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 33 0.25
Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 31 0.75
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81128-3|CAB03401.1| 410|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical pr... 29 4.0
U40029-8|AAA81128.2| 275|Caenorhabditis elegans Hypothetical pr... 29 4.0
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 29 4.0
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 29 4.0
AC024855-2|AAM97980.2| 466|Caenorhabditis elegans Hypothetical ... 29 4.0
AC024855-1|ABA00155.1| 468|Caenorhabditis elegans Hypothetical ... 29 4.0
AF022983-1|AAB69946.2| 324|Caenorhabditis elegans Serpentine re... 28 5.3
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 28 7.0
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z83110-6|CAB05528.3| 545|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81462-8|CAB03846.3| 545|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 9.2
U55374-1|AAP82639.1| 392|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 32.7 bits (71), Expect = 0.25
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Frame = +3
Query: 324 AVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANADELDLKLE-ESNGQNSK 500
++D ++ + ++ + T N+ I EE + ++A D LD + + E + K
Sbjct: 1322 SLDMQLSELTEASEEDRRTRATLNNKIRQLEEDL-AVAVEARDDALDAQEKIEKEVKEVK 1380
Query: 501 EMLAP----LPELSKWEVDDESADKKEGEVMSPKEKADGTKVTSDVIKRAENAIFAKA 662
+LA L E ++ EV +E KKE E+ + KE+AD + D +RA+ +A
Sbjct: 1381 SLLAEARKKLDEENR-EVMEELRKKKEKELSAEKERADMAEQARDKAERAKKKAIQEA 1437
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 32.7 bits (71), Expect = 0.25
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Frame = +3
Query: 324 AVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANADELDLKLE-ESNGQNSK 500
++D ++ + ++ + T N+ I EE + ++A D LD + + E + K
Sbjct: 1322 SLDMQLSELTEASEEDRRTRATLNNKIRQLEEDL-AVAVEARDDALDAQEKIEKEVKEVK 1380
Query: 501 EMLAP----LPELSKWEVDDESADKKEGEVMSPKEKADGTKVTSDVIKRAENAIFAKA 662
+LA L E ++ EV +E KKE E+ + KE+AD + D +RA+ +A
Sbjct: 1381 SLLAEARKKLDEENR-EVMEELRKKKEKELSAEKERADMAEQARDKAERAKKKAIQEA 1437
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 32.7 bits (71), Expect = 0.25
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Frame = +3
Query: 324 AVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANADELDLKLE-ESNGQNSK 500
++D ++ + ++ + T N+ I EE + ++A D LD + + E + K
Sbjct: 1322 SLDMQLSELTEASEEDRRTRATLNNKIRQLEEDL-AVAVEARDDALDAQEKIEKEVKEVK 1380
Query: 501 EMLAP----LPELSKWEVDDESADKKEGEVMSPKEKADGTKVTSDVIKRAENAIFAKA 662
+LA L E ++ EV +E KKE E+ + KE+AD + D +RA+ +A
Sbjct: 1381 SLLAEARKKLDEENR-EVMEELRKKKEKELSAEKERADMAEQARDKAERAKKKAIQEA 1437
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 324 AVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANADELDLKLEESN 485
A E IQ V + S P S++ + EP + ++Q A E + LEE+N
Sbjct: 3612 AAPSEPIQEEVPKEATLSEPTQEQSEVSKRSEPVEPTQIQQAASEEETPLEETN 3665
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 324 AVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANADELDLKLEESN 485
A E IQ V + S P S++ + EP + ++Q A E + LEE+N
Sbjct: 3612 AAPSEPIQEEVPKEATLSEPTQEQSEVSKRSEPVEPTQIQQAASEEETPLEETN 3665
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 324 AVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANADELDLKLEESN 485
A E IQ V + S P S++ + EP + ++Q A E + LEE+N
Sbjct: 3612 AAPSEPIQEEVPKEATLSEPTQEQSEVSKRSEPVEPTQIQQAASEEETPLEETN 3665
>Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical
protein T05A10.3 protein.
Length = 406
Score = 31.1 bits (67), Expect = 0.75
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +3
Query: 399 DIVTKEEPFDGIELQANADELDLKLEE-SNGQNSKEMLAPLPELSKWEVDDESADKKEGE 575
+I +EE IEL+ +E L+ E + + +E A L E + E +DE + E
Sbjct: 275 EIRRQEEEQQRIELERREEERRLESERRAEEERKREEEAKLQEQRRREQEDEHKRRMEEY 334
Query: 576 VMSPKEKADGTKVTSDVIKRAENAIFAKAIHS 671
+E+ + K + IKR E + + S
Sbjct: 335 HRREQERQEALKRREEEIKRREEGEKTRTVSS 366
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.75
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 438 LQANADELDLKLEESNGQNSKEMLAPLPELSKWEVDDESADKKEGEVM---SPKEKADGT 608
L+A D D+K N K+ P+ S DD+S+D++E E + SPK+ + T
Sbjct: 162 LEAYKDSHDMKPPPVKKSNKKKGSKKSPKKSAKSKDDDSSDEEEEEEVKEKSPKKSSKST 221
Query: 609 K 611
K
Sbjct: 222 K 222
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 430 PSKGSSLVTMSELLVSGTDSLTSFLT*VCIISLSTAPTTSSPYKSSNT 287
P + VT E + T S S + STAP+TSSP +S+T
Sbjct: 534 PGPSTDQVTSEEQEIPATSSAPSIFRTESPSTSSTAPSTSSPVTASST 581
>Z81128-3|CAB03401.1| 410|Caenorhabditis elegans Hypothetical
protein T23D8.3 protein.
Length = 410
Score = 28.7 bits (61), Expect = 4.0
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Frame = +3
Query: 270 EQKDKVVFDDLYGDEVVGAVDKE-IIQTYVKNDVNESVPETNNSDIVTKEEPFD---GIE 437
E D D+L+G+E VG + E Q + N E + N+D + + + D G
Sbjct: 163 EMYDDYNDDELFGEEAVGEIRVERADQRVIDNAFEELMDREYNTDQIGELDGDDYDVGGA 222
Query: 438 LQANADELDLKLEESNGQNSK--EMLAPLPELSKWEVDDESA--DKKEGEVMSPKE 593
L+ NA L + + N++ E LA + + +E DK+E E++ E
Sbjct: 223 LEPNAGRLHKLINDKGPSNAEYDEELAKHYVRERMRLIEEGVIKDKEEYEIVEVDE 278
>Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical
protein T05H10.6b protein.
Length = 414
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +3
Query: 252 TNSPKTEQKDKVVFDDLYGDEVVGAVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDG 431
T P T KD+++ L +E + A+DKE V+ +V+E++ + ++ E +
Sbjct: 324 TRDPITGFKDRIITSSLATEEELKAIDKE-----VRKEVDEALKIATSDGVLPPEALYAD 378
Query: 432 IELQANADEL 461
I A E+
Sbjct: 379 IYHNTPAQEI 388
>Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical
protein T05H10.6a protein.
Length = 397
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +3
Query: 252 TNSPKTEQKDKVVFDDLYGDEVVGAVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDG 431
T P T KD+++ L +E + A+DKE V+ +V+E++ + ++ E +
Sbjct: 307 TRDPITGFKDRIITSSLATEEELKAIDKE-----VRKEVDEALKIATSDGVLPPEALYAD 361
Query: 432 IELQANADEL 461
I A E+
Sbjct: 362 IYHNTPAQEI 371
>U40029-8|AAA81128.2| 275|Caenorhabditis elegans Hypothetical
protein F10G7.3 protein.
Length = 275
Score = 28.7 bits (61), Expect = 4.0
Identities = 23/105 (21%), Positives = 47/105 (44%)
Frame = +3
Query: 309 DEVVGAVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANADELDLKLEESNG 488
D V V+ E + + ++D+ +P ++ EE D E++ANA+E+DL N
Sbjct: 158 DPVAEPVEDEANRVFAEDDL---MPLNDDGQEDDDEEEEDDDEMEANAEEVDL-----NE 209
Query: 489 QNSKEMLAPLPELSKWEVDDESADKKEGEVMSPKEKADGTKVTSD 623
++ + L + D++ D E + + G ++ +D
Sbjct: 210 SFNERLANALDGAEQKGADEKMEDDGANEDVDMADDEPGVQINTD 254
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 438 LQANADELDLKLEESNGQNSKEMLAPLPELSKWEVDDESADKKEGEVMS 584
+Q +++K+E+S G N+ + + LP E + E A K+E V++
Sbjct: 164 IQKTMQPIEVKIEDSEGSNTAQP-SVLPSCGGGETNVERAAKREAHVLA 211
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 438 LQANADELDLKLEESNGQNSKEMLAPLPELSKWEVDDESADKKEGEVMS 584
+Q +++K+E+S G N+ + + LP E + E A K+E V++
Sbjct: 164 IQKTMQPIEVKIEDSEGSNTAQP-SVLPSCGGGETNVERAAKREAHVLA 211
>AC024855-2|AAM97980.2| 466|Caenorhabditis elegans Hypothetical
protein Y71G10AL.1a protein.
Length = 466
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +3
Query: 360 NDVNESVPETNNSDIVTKEEPFDGIELQANADELDLKLEESNGQNSKEMLAPLPELSKWE 539
+DV+ + + D + + G + +E D+K EE G KE P+ +E
Sbjct: 173 DDVDVGGGDDDEIDELMDHDDEGGHDEHEEDEESDVKKEEEKGSEKKEKKPEPPKKKVYE 232
Query: 540 VDDESA 557
+DE A
Sbjct: 233 DEDEKA 238
>AC024855-1|ABA00155.1| 468|Caenorhabditis elegans Hypothetical
protein Y71G10AL.1b protein.
Length = 468
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +3
Query: 360 NDVNESVPETNNSDIVTKEEPFDGIELQANADELDLKLEESNGQNSKEMLAPLPELSKWE 539
+DV+ + + D + + G + +E D+K EE G KE P+ +E
Sbjct: 175 DDVDVGGGDDDEIDELMDHDDEGGHDEHEEDEESDVKKEEEKGSEKKEKKPEPPKKKVYE 234
Query: 540 VDDESA 557
+DE A
Sbjct: 235 DEDEKA 240
>AF022983-1|AAB69946.2| 324|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 16 protein.
Length = 324
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = -1
Query: 442 CNSIPSKGSSLVTMSELLVSGTDSLTSFLT*VCIISLSTAPTTSSPYKSSNTTLSFCSVF 263
C +PS L T + S+ T ++ + A Y++ + TL +C +F
Sbjct: 88 CEKVPSVKRCLATRIPYIFGLF--CASYSTVFMVLERTIATKNYKKYENRHKTLGYCFIF 145
Query: 262 GELVVG 245
G++ +G
Sbjct: 146 GQIFMG 151
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +3
Query: 366 VNESVPETNNSDIVTKEEPFDGIELQANADELDLKLEESNGQNSKEMLAPLPELSKWEVD 545
+++S E ++ D ++E D E + + DE D + EE+ + +E E S+ E D
Sbjct: 569 LDDSDEEEDDDD---EDEEEDEDEEEEDEDEEDEEEEENESEEEEE--DDEDEESEEESD 623
Query: 546 DESADKKEGEVMSPKEK 596
+E +++E + P+EK
Sbjct: 624 EEDEEEEEEDDSEPEEK 640
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/85 (23%), Positives = 37/85 (43%)
Frame = +3
Query: 279 DKVVFDDLYGDEVVGAVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANADE 458
+++ DD +E D+E + + D +E E ++ +EE + E + +DE
Sbjct: 565 NELKLDDSDEEEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEEDDEDEESEEESDE 624
Query: 459 LDLKLEESNGQNSKEMLAPLPELSK 533
D + EE + +E P P K
Sbjct: 625 EDEEEEEEDDSEPEEKPNPKPSTKK 649
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +3
Query: 366 VNESVPETNNSDIVTKEEPFDGIELQANADELDLKLEESNGQNSKEMLAPLPELSKWEVD 545
+++S E ++ D ++E D E + + DE D + EE+ + +E E S+ E D
Sbjct: 579 LDDSDEEEDDDD---EDEEEDEDEEEEDEDEEDEEEEENESEEEEE--DDEDEESEEESD 633
Query: 546 DESADKKEGEVMSPKEK 596
+E +++E + P+EK
Sbjct: 634 EEDEEEEEEDDSEPEEK 650
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/85 (23%), Positives = 37/85 (43%)
Frame = +3
Query: 279 DKVVFDDLYGDEVVGAVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANADE 458
+++ DD +E D+E + + D +E E ++ +EE + E + +DE
Sbjct: 575 NELKLDDSDEEEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEEDDEDEESEEESDE 634
Query: 459 LDLKLEESNGQNSKEMLAPLPELSK 533
D + EE + +E P P K
Sbjct: 635 EDEEEEEEDDSEPEEKPNPKPSTKK 659
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
protein C01B9.1b protein.
Length = 1671
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 432 IELQANADELDLKLEESNGQNSKEMLAPLPELS 530
IEL+ E LKL+E N N+KE A +LS
Sbjct: 804 IELKTTVQEAKLKLKEINVTNAKEFKAESFQLS 836
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
protein C01B9.1a protein.
Length = 1601
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 432 IELQANADELDLKLEESNGQNSKEMLAPLPELS 530
IEL+ E LKL+E N N+KE A +LS
Sbjct: 734 IELKTTVQEAKLKLKEINVTNAKEFKAESFQLS 766
>Z83110-6|CAB05528.3| 545|Caenorhabditis elegans Hypothetical
protein F57C2.6 protein.
Length = 545
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 414 EEPFDGIELQANADELDLKLEESNGQNSKEMLAPLPELSKWEVDD 548
E+ D +E + DL L E+NGQ+ + L+P+ + ++D+
Sbjct: 334 EDEADDVENSSMLSNDDLMLNETNGQHFNDSLSPVRKDVTDDIDE 378
>Z81462-8|CAB03846.3| 545|Caenorhabditis elegans Hypothetical
protein F57C2.6 protein.
Length = 545
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 414 EEPFDGIELQANADELDLKLEESNGQNSKEMLAPLPELSKWEVDD 548
E+ D +E + DL L E+NGQ+ + L+P+ + ++D+
Sbjct: 334 EDEADDVENSSMLSNDDLMLNETNGQHFNDSLSPVRKDVTDDIDE 378
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 27.5 bits (58), Expect = 9.2
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Frame = +3
Query: 339 IIQTYVKNDVNESVPE-TNNSDIVTKEEPFDGIELQANADELDLKLEESNGQNSKEMLAP 515
+I+ Y ND +S + T++S E F + Q +D+ + +E SN ++ + +
Sbjct: 346 VIEKYYNNDFEKSAQQKTSSSKNKVAEPSFKKSKRQEESDDEESDVEMSNSESEGDQDSD 405
Query: 516 L-----PELSKWEVDD----ESADKKEGEVM--SPKEKADGTK 611
E+S + DD S D++E SPK+ A GT+
Sbjct: 406 SGSDNEEEISGSDSDDVSEISSDDEEESSFKENSPKKVARGTR 448
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +3
Query: 324 AVDKEIIQTYVKNDVN-ESVPETNNSDIVTKEEPFDGIELQANADELDLKLEESNGQNSK 500
A K I++ Y++ E E SD+ + EE ++ Q + DLK + + +++
Sbjct: 694 ADQKHILEDYLRKIRQAEETNEKLRSDLASSEEQILDLKNQQESLIDDLKEKLHSAESTN 753
Query: 501 EMLAPLPELSKWEVDDESADKKEGEVMSPKEKA 599
+ L E+ K EV + E EV+ +A
Sbjct: 754 QELQVSLEMLKIEVSNARQKVMESEVLKESFEA 786
>U55374-1|AAP82639.1| 392|Caenorhabditis elegans Hypothetical
protein T02C5.1b protein.
Length = 392
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +3
Query: 336 EIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIEL-QANADELDLKLEESNGQNSKEMLA 512
E++ + +E V E D K E + I+ + N D LE+ +
Sbjct: 105 ELVNVFDDEKDSEEVEELPIKDNFIKGENLEMIDSNEINYDMARNSLEDVYDSQEHQ--- 161
Query: 513 PLPELSKWEVDDESADKKEGEVMSPKEKADGTKVTSDVIK 632
LP+ + E DD S+ ++ GE E G+++ S+ +K
Sbjct: 162 -LPDPTYEEGDDSSSSEEIGEEEKTDENEIGSEIVSEKVK 200
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,147,758
Number of Sequences: 27780
Number of extensions: 195237
Number of successful extensions: 916
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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