Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte12a05
(542 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X74104-1|CAA52207.1| 183|Homo sapiens translocon-associated pro... 117 3e-26
D37991-1|BAA07206.1| 183|Homo sapiens beta-signal sequence rece... 117 3e-26
CR456973-1|CAG33254.1| 183|Homo sapiens SSR2 protein. 117 3e-26
BX649192-1|CAE46211.1| 143|Homo sapiens hypothetical protein pr... 117 3e-26
BC000341-1|AAH00341.2| 183|Homo sapiens signal sequence recepto... 117 3e-26
AL355388-12|CAH72632.1| 146|Homo sapiens signal sequence recept... 117 3e-26
AL355388-11|CAH72631.1| 202|Homo sapiens signal sequence recept... 117 3e-26
AK222600-1|BAD96320.1| 183|Homo sapiens signal sequence recepto... 116 7e-26
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p... 30 4.6
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance... 30 4.6
BC029653-1|AAH29653.1| 886|Homo sapiens ZFHX3 protein protein. 30 4.6
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein. 30 4.6
>X74104-1|CAA52207.1| 183|Homo sapiens translocon-associated
protein protein.
Length = 183
Score = 117 bits (281), Expect = 3e-26
Identities = 58/118 (49%), Positives = 81/118 (68%)
Frame = +2
Query: 89 KLLYFVLFIAAAVSADDEPVLARLLVSKQVLNKYLVENMDILVKYTLFNVGSAPAVEVKL 268
+LL FV+ AV+ +E ARLL SK +LN+Y VE D+ ++Y ++NVGS+ A++V+L
Sbjct: 2 RLLSFVVLALFAVTQAEEG--ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVEL 59
Query: 269 VDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASED 442
D+ F P+ F +V G L + DRIAP +NVSH V +R K GYFNF+SA +TY A ED
Sbjct: 60 SDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQED 117
>D37991-1|BAA07206.1| 183|Homo sapiens beta-signal sequence
receptor protein.
Length = 183
Score = 117 bits (281), Expect = 3e-26
Identities = 58/118 (49%), Positives = 81/118 (68%)
Frame = +2
Query: 89 KLLYFVLFIAAAVSADDEPVLARLLVSKQVLNKYLVENMDILVKYTLFNVGSAPAVEVKL 268
+LL FV+ AV+ +E ARLL SK +LN+Y VE D+ ++Y ++NVGS+ A++V+L
Sbjct: 2 RLLSFVVLALFAVTQAEEG--ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVEL 59
Query: 269 VDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASED 442
D+ F P+ F +V G L + DRIAP +NVSH V +R K GYFNF+SA +TY A ED
Sbjct: 60 SDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQED 117
>CR456973-1|CAG33254.1| 183|Homo sapiens SSR2 protein.
Length = 183
Score = 117 bits (281), Expect = 3e-26
Identities = 58/118 (49%), Positives = 81/118 (68%)
Frame = +2
Query: 89 KLLYFVLFIAAAVSADDEPVLARLLVSKQVLNKYLVENMDILVKYTLFNVGSAPAVEVKL 268
+LL FV+ AV+ +E ARLL SK +LN+Y VE D+ ++Y ++NVGS+ A++V+L
Sbjct: 2 RLLSFVVLALFAVTQAEEG--ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVEL 59
Query: 269 VDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASED 442
D+ F P+ F +V G L + DRIAP +NVSH V +R K GYFNF+SA +TY A ED
Sbjct: 60 SDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQED 117
>BX649192-1|CAE46211.1| 143|Homo sapiens hypothetical protein
protein.
Length = 143
Score = 117 bits (281), Expect = 3e-26
Identities = 58/118 (49%), Positives = 81/118 (68%)
Frame = +2
Query: 89 KLLYFVLFIAAAVSADDEPVLARLLVSKQVLNKYLVENMDILVKYTLFNVGSAPAVEVKL 268
+LL FV+ AV+ +E ARLL SK +LN+Y VE D+ ++Y ++NVGS+ A++V+L
Sbjct: 23 RLLSFVVLALFAVTQAEEG--ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVEL 80
Query: 269 VDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASED 442
D+ F P+ F +V G L + DRIAP +NVSH V +R K GYFNF+SA +TY A ED
Sbjct: 81 SDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQED 138
>BC000341-1|AAH00341.2| 183|Homo sapiens signal sequence receptor,
beta (translocon-associated protein beta) protein.
Length = 183
Score = 117 bits (281), Expect = 3e-26
Identities = 58/118 (49%), Positives = 81/118 (68%)
Frame = +2
Query: 89 KLLYFVLFIAAAVSADDEPVLARLLVSKQVLNKYLVENMDILVKYTLFNVGSAPAVEVKL 268
+LL FV+ AV+ +E ARLL SK +LN+Y VE D+ ++Y ++NVGS+ A++V+L
Sbjct: 2 RLLSFVVLALFAVTQAEEG--ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVEL 59
Query: 269 VDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASED 442
D+ F P+ F +V G L + DRIAP +NVSH V +R K GYFNF+SA +TY A ED
Sbjct: 60 SDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQED 117
>AL355388-12|CAH72632.1| 146|Homo sapiens signal sequence receptor,
beta (translocon-associated protein beta) protein.
Length = 146
Score = 117 bits (281), Expect = 3e-26
Identities = 58/118 (49%), Positives = 81/118 (68%)
Frame = +2
Query: 89 KLLYFVLFIAAAVSADDEPVLARLLVSKQVLNKYLVENMDILVKYTLFNVGSAPAVEVKL 268
+LL FV+ AV+ +E ARLL SK +LN+Y VE D+ ++Y ++NVGS+ A++V+L
Sbjct: 21 RLLSFVVLALFAVTQAEEG--ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVEL 78
Query: 269 VDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASED 442
D+ F P+ F +V G L + DRIAP +NVSH V +R K GYFNF+SA +TY A ED
Sbjct: 79 SDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQED 136
>AL355388-11|CAH72631.1| 202|Homo sapiens signal sequence receptor,
beta (translocon-associated protein beta) protein.
Length = 202
Score = 117 bits (281), Expect = 3e-26
Identities = 58/118 (49%), Positives = 81/118 (68%)
Frame = +2
Query: 89 KLLYFVLFIAAAVSADDEPVLARLLVSKQVLNKYLVENMDILVKYTLFNVGSAPAVEVKL 268
+LL FV+ AV+ +E ARLL SK +LN+Y VE D+ ++Y ++NVGS+ A++V+L
Sbjct: 21 RLLSFVVLALFAVTQAEEG--ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVEL 78
Query: 269 VDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASED 442
D+ F P+ F +V G L + DRIAP +NVSH V +R K GYFNF+SA +TY A ED
Sbjct: 79 SDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQED 136
>AK222600-1|BAD96320.1| 183|Homo sapiens signal sequence receptor,
beta precursor variant protein.
Length = 183
Score = 116 bits (278), Expect = 7e-26
Identities = 58/118 (49%), Positives = 80/118 (67%)
Frame = +2
Query: 89 KLLYFVLFIAAAVSADDEPVLARLLVSKQVLNKYLVENMDILVKYTLFNVGSAPAVEVKL 268
+LL FV+ AV+ +E ARLL SK +LN+Y VE D+ ++Y +NVGS+ A++V+L
Sbjct: 2 RLLSFVVLALFAVTQAEEG--ARLLASKSLLNRYAVEGRDLTLQYNTYNVGSSAALDVEL 59
Query: 269 VDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASED 442
D+ F P+ F +V G L + DRIAP +NVSH V +R K GYFNF+SA +TY A ED
Sbjct: 60 SDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQED 117
>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
protein protein.
Length = 3703
Score = 30.3 bits (65), Expect = 4.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -3
Query: 333 SISAVSCPPTTVNTSGWKPLSTSFTSTAGALPTLN 229
SIS S P+ V+TSG +TS S+AG P+ N
Sbjct: 1644 SISLSSSTPSPVSTSGSNTFTTSNPSSAGIAPSSN 1678
>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
binding protein protein.
Length = 2783
Score = 30.3 bits (65), Expect = 4.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -3
Query: 333 SISAVSCPPTTVNTSGWKPLSTSFTSTAGALPTLN 229
SIS S P+ V+TSG +TS S+AG P+ N
Sbjct: 730 SISLSSSTPSPVSTSGSNTFTTSNPSSAGIAPSSN 764
>BC029653-1|AAH29653.1| 886|Homo sapiens ZFHX3 protein protein.
Length = 886
Score = 30.3 bits (65), Expect = 4.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -3
Query: 333 SISAVSCPPTTVNTSGWKPLSTSFTSTAGALPTLN 229
SIS S P+ V+TSG +TS S+AG P+ N
Sbjct: 730 SISLSSSTPSPVSTSGSNTFTTSNPSSAGIAPSSN 764
>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
Length = 2553
Score = 30.3 bits (65), Expect = 4.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -3
Query: 333 SISAVSCPPTTVNTSGWKPLSTSFTSTAGALPTLN 229
SIS S P+ V+TSG +TS S+AG P+ N
Sbjct: 494 SISLSSSTPSPVSTSGSNTFTTSNPSSAGIAPSSN 528
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,984,823
Number of Sequences: 237096
Number of extensions: 1291005
Number of successful extensions: 2009
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2009
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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