Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12a04
         (669 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670...   123   1e-28
01_01_0001 + 2449-2616,3357-3455,4457-4560,6136-6944,7028-7150,7...    28   5.9  
07_03_0961 - 22921761-22921850,22922204-22922338,22922409-229225...    28   7.7  

>07_03_0151 -
           14465479-14465675,14466280-14466401,14466934-14467081,
           14467146-14467167,14467299-14467393,14467395-14467438,
           14467750-14467841,14467911-14467982,14468188-14468229,
           14468333-14468494,14468631-14468683,14468808-14468925,
           14468974-14469150,14469573-14469639,14470195-14470273,
           14473805-14473862,14474257-14474346,14474429-14474540,
           14474649-14474912,14475361-14475463,14476200-14476278,
           14476748-14476852
          Length = 766

 Score =  123 bits (296), Expect = 1e-28
 Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 2/185 (1%)
 Frame = +3

Query: 117 DVATLYQNLKTEWAKKPRKLDKCGELLNKIKIALTQLTFLP-SNNVAANQ-KELILARDV 290
           +V  L+   K  +A+     D C +LL+++K+ LT+   LP S     N  +EL +ARD+
Sbjct: 7   EVTQLFSRFKAAFARND--FDTCVDLLSQLKVRLTKFPSLPPSFQQTPNAVEELKIARDI 64

Query: 291 LEIGAQWAVAVKDVKAFERYMSQLKCYYFDYKDHLPESAFTNQXXXXXXXXXXSQNRVAE 470
            E     +V ++D  AFER   QLK YY D    +P S                QNR+AE
Sbjct: 65  YEHAVVLSVKIEDQDAFERDFCQLKPYYMDTCGIIPPSPQEYPILGLNLLRLLVQNRIAE 124

Query: 471 FHTELERLPVDVIRTDLYIRHPLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETV 650
           FHTELE LPV  +     I+H + LEQ  MEG+YN++  A+  VP E+Y +FMD L +TV
Sbjct: 125 FHTELELLPVTALENPC-IKHAVELEQSFMEGAYNRVLSARQAVPHETYVYFMDLLAKTV 183

Query: 651 RGEIA 665
           R E+A
Sbjct: 184 RDELA 188


>01_01_0001 +
           2449-2616,3357-3455,4457-4560,6136-6944,7028-7150,
           7232-7320,7408-7608,8210-8311,9104-9187,9232-9244,
           9504-9562
          Length = 616

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = +3

Query: 450 SQNRVAEFHTELERLPVDVIRTDLYI 527
           S++RV+E+   L R+ VDV+RTD ++
Sbjct: 379 SKDRVSEWLWTLHRIVVDVVRTDSHL 404


>07_03_0961 -
           22921761-22921850,22922204-22922338,22922409-22922531,
           22922621-22922707,22922780-22922831,22922939-22923063,
           22923724-22923932,22924206-22924407,22924526-22924630,
           22925353-22925414,22925755-22925944,22926017-22926112,
           22926203-22926305,22927019-22927122,22927264-22927395,
           22928257-22928343,22929121-22929206,22929291-22929383,
           22932197-22932284,22932402-22932514,22932621-22932743,
           22934153-22934204,22934365-22934408,22934498-22934571,
           22934655-22934746,22935594-22935661,22937146-22937221,
           22937323-22937679
          Length = 1055

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
 Frame = +3

Query: 471 FHTELERL-PVDVIRTDLYIRHPLA-LEQYLMEGSYNKIFLA-KGN-----VPAESYTFF 626
           FH  L R  P  ++ TD++ R  +  L  Y  +     ++ A K N     +    Y   
Sbjct: 630 FHCPLSRSSPESIVLTDMFTRLLMDYLNDYAYDAQVAGLYYAVKPNDTGFQITMVGYNDK 689

Query: 627 MDTLLETVRGEIAA 668
           M TLLETV G+IAA
Sbjct: 690 MRTLLETVIGKIAA 703


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,854,186
Number of Sequences: 37544
Number of extensions: 327834
Number of successful extensions: 718
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)