Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte12a02
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    25   2.8  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   5.0  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   6.5  

>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 442 GVQSLV*CLGRSPSSVGMFASSSVLITGSCDKLF 341
           G+Q L  C+  +P ++     SSV + G  + L+
Sbjct: 587 GLQQLCCCIRHTPPAIARNVGSSVALAGEMNGLY 620


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +1

Query: 82  PEPSSYGTMA*STKWSHSFKIKRIFLRTTKRATTWSRSCRMSCARTSRRFRVTSLLRTK 258
           P+ +  GT+    K S   + K +   +  R+ + SRS   S +R SR    TS  R++
Sbjct: 390 PDTAGGGTVGDGKKRSSRSRSKSLSKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQSRSR 448


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 348 LSQLPVINTDDDANMPTEDGDRPKHHTSDWTP 443
           L  LP+   DDD   PT +GD       D +P
Sbjct: 427 LPALPLPGGDDDLFSPTGNGDMSPTCCGDLSP 458


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,160
Number of Sequences: 2352
Number of extensions: 11619
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)