Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11p17
         (635 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0149 - 22733703-22736216                                         30   1.3  
02_04_0324 + 22032748-22032895,22035274-22035593,22035709-22036797     29   3.1  
02_05_1282 + 35442730-35442841,35443040-35443105,35443195-354432...    29   4.1  
01_05_0634 + 23843152-23843272,23843441-23843628,23843876-238442...    29   4.1  
10_08_0015 + 14116129-14116691,14116810-14117128,14117588-141186...    28   5.4  
11_06_0065 - 19736265-19737302                                         28   7.1  
03_02_0985 - 12961787-12961984,12963177-12963337,12965332-129654...    27   9.4  

>05_05_0149 - 22733703-22736216
          Length = 837

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
 Frame = -3

Query: 492 TEQNASSHQTVIVDEETERAKESKEQDNCAAVDDSPPLVD-LDQHR*VTASSQ*K*NTDG 316
           T QNA  ++     ++  +  ++ E++  A V DS  LVD L Q   V  + Q   +   
Sbjct: 332 TSQNAQINRMKTEIDDLHKCLQALEEEKSALVADSSKLVDRLKQVEEVLQAVQ---HLGN 388

Query: 315 AQQNGRHAQNHLDRRLR*CAEVREHI--LHVPEP 220
           + QNG   QN        C+E+ E +  LH PEP
Sbjct: 389 SIQNG--TQNIHKEMNAACSELAEFVEKLHEPEP 420


>02_04_0324 + 22032748-22032895,22035274-22035593,22035709-22036797
          Length = 518

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/52 (38%), Positives = 26/52 (50%)
 Frame = +3

Query: 276 GPNGSGHGVHFVVLRQCFTSIGSLL*LTGADRDLPVGGYRLQQHSCLALYFP 431
           G NG G  V F V+  C T+ G++  L G   D+ V G   Q  S L  +FP
Sbjct: 16  GGNGGGDEVTFTVVMSCLTA-GAVGLLLG--YDIGVTGGLTQMESFLQAFFP 64


>02_05_1282 +
           35442730-35442841,35443040-35443105,35443195-35443282,
           35443393-35443474,35443589-35443740,35443866-35443990,
           35444309-35444367
          Length = 227

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +1

Query: 19  DEIIKYFNVNAKKIPKI*SSFK-MKFMDKLPT--VISCCFCCFLRAGTVMI 162
           +EIIKY  + AK   +  + F  + F  ++P    +SCC C FL A  V+I
Sbjct: 154 EEIIKYEEMAAKHSLQFWACFSSLIFCVEVPDFMALSCCCCVFLFAEDVII 204


>01_05_0634 +
           23843152-23843272,23843441-23843628,23843876-23844205,
           23844319-23844565,23844591-23844668,23844740-23845024,
           23845139-23845225,23845365-23845415,23845625-23845761,
           23845853-23846437
          Length = 702

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = -3

Query: 561 ERHPQTIHDKHEIRGQKHYN-EDKTEQNASSHQTVIVDEETERAKESKEQDNCAA 400
           +RH  ++H K +I G++    E KT  +ASS++ +    ET  AKE  E+  C++
Sbjct: 507 KRH--SLHTKRKILGKRISELEQKTVHDASSNEALGQLGETVNAKECIERKLCSS 559


>10_08_0015 +
           14116129-14116691,14116810-14117128,14117588-14118664,
           14118754-14119056
          Length = 753

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 9/25 (36%), Positives = 19/25 (76%)
 Frame = -3

Query: 546 TIHDKHEIRGQKHYNEDKTEQNASS 472
           T H K EI+ ++H++E++ E++ +S
Sbjct: 435 TFHKKREIKRKRHFDENRGEESVAS 459


>11_06_0065 - 19736265-19737302
          Length = 345

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 192 SQTDDERKCGYHHSSSP*ETTEATAY 115
           S  DD+  C YHH S   E   A AY
Sbjct: 259 SDDDDDDDCCYHHESDGGELAPAAAY 284


>03_02_0985 -
           12961787-12961984,12963177-12963337,12965332-12965489,
           12966015-12966105,12966715-12966752,12966994-12967154,
           12967249-12968687,12968815-12969227,12969630-12970987,
           12971089-12971454,12971533-12971696,12971748-12971820,
           12972967-12973113
          Length = 1588

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 195 RAKREPNVRVLGHGECALELQHIIGDDGPNG 287
           R ++E   RV+GHG+  LE      DD   G
Sbjct: 5   RGRQEEGFRVMGHGDVELEEGEAFPDDDGGG 35


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,632,097
Number of Sequences: 37544
Number of extensions: 321736
Number of successful extensions: 1001
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)